RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 VTI1BQ9UEU0 232 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.55
ATXN3-241ENST00000556374 EDC4Q6P2E9 1401 aaKnown RBP5.4□□□□□ -1.55
ATXN3-241ENST00000556374 PPIP5K1Q6PFW1 1433 aa5.4□□□□□ -1.55
ATXN3-241ENST00000556374 SSH2Q76I76 1423 aa5.4□□□□□ -1.55
ATXN3-241ENST00000556374 SLC22A31A6NKX4 558 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 NRDCO43847 1150 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 TRIM27P14373 513 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 LINC00310P59036 64 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 NMIQ13287 307 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-241ENST00000556374 OLFML2BQ68BL8 750 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 AEBP1Q8IUX7 1158 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 TMEM151BQ8IW70 566 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 GCC1Q96CN9 775 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 G6PC3Q9BUM1 346 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 MCOLN1Q9GZU1 580 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 ISY1Q9ULR0 285 aaKnown RBP5.39□□□□□ -1.55
ATXN3-241ENST00000556374 NHSQ6T4R5 1651 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 TNS2Q63HR2 1409 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 CD163L1Q9NR16 1453 aa5.39□□□□□ -1.55
ATXN3-241ENST00000556374 ABLIM1O14639 778 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 EIF4A3P38919 411 aaKnown RBP5.38□□□□□ -1.55
ATXN3-241ENST00000556374 PCBP3P57721 371 aaKnown RBP5.38□□□□□ -1.55
ATXN3-241ENST00000556374 GNAI1P63096 354 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 NBPF9Q3BBW0 867 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 NBPF12Q5TAG4 269 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-241ENST00000556374 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 TMEM57Q8N5G2 664 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 USHBP1Q8N6Y0 703 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 SSH1Q8WYL5 1049 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 ANP32BQ92688 251 aaKnown RBP5.38□□□□□ -1.55
ATXN3-241ENST00000556374 SHISA4Q96DD7 197 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 API5Q9BZZ5 524 aaKnown RBP5.38□□□□□ -1.55
ATXN3-241ENST00000556374 CNNM2Q9H8M5 875 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 KLHL3Q9UH77 587 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 NOB1Q9ULX3 412 aaKnown RBP5.38□□□□□ -1.55
ATXN3-241ENST00000556374 USP19O94966 1318 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 AATKQ6ZMQ8 1374 aa5.38□□□□□ -1.55
ATXN3-241ENST00000556374 PIK3C2AO00443 1686 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 OR14I1A6ND48 311 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 MEIS3P2A8K0S8 358 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 B8ZZF3 427 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 PLSCR1O15162 318 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 LRRN2O75325 713 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 UBOX5O94941 541 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 RAG1P15918 1043 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 PRKAR2BP31323 418 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 DLG4P78352 724 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 RBM10P98175 930 aaKnown RBP5.37□□□□□ -1.55
ATXN3-241ENST00000556374 NFE2L2Q16236 605 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 ZNF385BQ569K4 471 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 INTS3Q68E01 1043 aaKnown RBP5.37□□□□□ -1.55
ATXN3-241ENST00000556374 FBXL19Q6PCT2 694 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 NLRX1Q86UT6 975 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 CHD1LQ86WJ1 897 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 SMC5Q8IY18 1101 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 DNAJC5GQ8N7S2 189 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 TRIM44Q96DX7 344 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-241ENST00000556374 MAP6Q96JE9 813 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 PLEKHF1Q96S99 279 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 KIF2CQ99661 725 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 IFT57Q9NWB7 429 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 STK32BQ9NY57 414 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 TNFRSF10DQ9UBN6 386 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 TNNQ9UQP3 1299 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 KIF24Q5T7B8 1368 aa5.37□□□□□ -1.55
ATXN3-241ENST00000556374 MYOCOSA0A1B0GUC4 107 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 SHISA3A0PJX4 238 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 RFXAPO00287 272 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 PRRG2O14669 202 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 NUAK1O60285 661 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 GRIN3BO60391 1043 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 DNAJA2O60884 412 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 CDC45O75419 566 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 MCM4P33991 863 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 ZNF165P49910 485 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 NUCB1Q02818 461 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 TMEM62Q0P6H9 643 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 SKOR2Q2VWA4 1001 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-241ENST00000556374 BMP2KLQ5H9B9 411 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 HS2ST1Q7LGA3 356 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 ARHGAP45Q92619 1136 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 TCTN2Q96GX1 697 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 COG3Q96JB2 828 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 FAM161BQ96MY7 647 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 CDK19Q9BWU1 502 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 LNPKQ9C0E8 428 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 PRDM11Q9NQV5 511 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 KBTBD4Q9NVX7 518 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 GPR160Q9UJ42 338 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 NCANO14594 1321 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 KIAA0232Q92628 1395 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 ANKARQ7Z5J8 1434 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 CICQ96RK0 1608 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-241ENST00000556374 BTAF1O14981 1849 aa5.36□□□□□ -1.55
ATXN3-241ENST00000556374 MAP2P11137 1827 aaKnown RBP5.36□□□□□ -1.55
ATXN3-241ENST00000556374 ABCC4O15439 1325 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 SSU72P8A0A1W2PR75 194 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 MINDY4BA8MYZ0 360 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 TNFRSF10CO14798 259 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms