RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 STAM2O75886 525 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 RGS20O76081 388 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 GH1P01241 217 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 CLTBP09497 229 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-205ENST00000556310 NAPAP54920 295 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 HABP4Q5JVS0 413 aaKnown RBP13.26□□□□□ -0.29
SLIRP-205ENST00000556310 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 VTI1AQ96AJ9 217 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
SLIRP-205ENST00000556310 PRDM5Q9NQX1 630 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-205ENST00000556310 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
SLIRP-205ENST00000556310 DDX41Q9UJV9 622 aaKnown RBP13.26□□□□□ -0.29
SLIRP-205ENST00000556310 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-205ENST00000556310 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 STXBP3O00186 592 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 ARVCFO00192 962 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
SLIRP-205ENST00000556310 BMP8BP34820 402 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 CDK7P50613 346 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 PURAQ00577 322 aaKnown RBP13.25□□□□□ -0.29
SLIRP-205ENST00000556310 ARHGAP1Q07960 439 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 UBE2SQ16763 222 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-205ENST00000556310 LY6KQ17RY6 165 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 GNPTABQ3T906 1256 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 TYW1BQ6NUM6 668 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-205ENST00000556310 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-205ENST00000556310 SEZ6LQ9BYH1 1024 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 BARHL2Q9NY43 387 aa13.25□□□□□ -0.29
SLIRP-205ENST00000556310 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 KIAA0355O15063 1070 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 KPNA6O60684 536 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 MMP3P08254 477 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 MYL3P08590 195 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 TGFB3P10600 412 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 SCG2P13521 617 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 IFNAR1P17181 557 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 ADCY7P51828 1080 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
SLIRP-205ENST00000556310 ITGA7Q13683 1181 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 NTRK3Q16288 839 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 FAM126BQ8IXS8 530 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 ZNF274Q96GC6 653 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-205ENST00000556310 LBHD1Q9BQE6 289 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-205ENST00000556310 MTG1Q9BT17 334 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-205ENST00000556310 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-205ENST00000556310 GLT8D2Q9H1C3 349 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
SLIRP-205ENST00000556310 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 TRIM43BA6NCK2 446 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 TLR3O15455 904 aaKnown RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 UBA1P22314 1058 aaKnown RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 ICAM3P32942 547 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 FAAP100Q0VG06 881 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 LAMC2Q13753 1193 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 AFG1LQ8WV93 481 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 EHMT1Q9H9B1 1298 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 NCOA5Q9HCD5 579 aaKnown RBP13.23□□□□□ -0.29
SLIRP-205ENST00000556310 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
SLIRP-205ENST00000556310 LAMA3Q16787 3333 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 FIBPO43427 364 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 GGPS1O95749 300 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 PSMC6P62333 389 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
SLIRP-205ENST00000556310 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 PKN1Q16512 942 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
SLIRP-205ENST00000556310 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-205ENST00000556310 PHKBQ93100 1093 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
SLIRP-205ENST00000556310 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
SLIRP-205ENST00000556310 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-205ENST00000556310 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
SLIRP-205ENST00000556310 TANC1Q9C0D5 1861 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 SMCO2A6NFE2 343 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 SPATA31C2B4DYI2 1134 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-205ENST00000556310 CD4P01730 458 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-205ENST00000556310 RAG1P15918 1043 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
SLIRP-205ENST00000556310 SP2Q02086 613 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms