RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ZMYND12Q9H0C1 365 aa17.4■□□□□ 0.38
ACTN1-217ENST00000556203 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
ACTN1-217ENST00000556203 VPS54Q9P1Q0 977 aa17.4■□□□□ 0.38
ACTN1-217ENST00000556203 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
ACTN1-217ENST00000556203 MROH7Q68CQ1 1323 aa17.4■□□□□ 0.38
ACTN1-217ENST00000556203 TRIM43BA6NCK2 446 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 SPATA31C2B4DYI2 1134 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 FIBPO43427 364 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
ACTN1-217ENST00000556203 ITGB5P18084 799 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
ACTN1-217ENST00000556203 SEMA3FQ13275 785 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 SLC43A3Q8NBI5 491 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 CCDC148Q8NFR7 591 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 PPTC7Q8NI37 304 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 TRIM43Q96BQ3 446 aaPredicted RBP17.39■□□□□ 0.37
ACTN1-217ENST00000556203 SPATA33Q96N06 139 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
ACTN1-217ENST00000556203 ADAMTS3O15072 1205 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 CDKL5O76039 1030 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 DEXIO95424 95 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 LARGE1O95461 756 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 GNA11P29992 359 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 MDM2Q00987 491 aaPredicted RBP17.38■□□□□ 0.37
ACTN1-217ENST00000556203 FAAP100Q0VG06 881 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 DGKDQ16760 1214 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 ME3Q16798 604 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 MYSM1Q5VVJ2 828 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 FAM126BQ8IXS8 530 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 GDF15Q99988 308 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 MLXIPQ9HAP2 919 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 TMEM39AQ9NV64 488 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 UBIAD1Q9Y5Z9 338 aa17.38■□□□□ 0.37
ACTN1-217ENST00000556203 NEDD9Q14511 834 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 HSDL1Q3SXM5 330 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
ACTN1-217ENST00000556203 NECAB1Q8N987 351 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 GPRASP2Q96D09 838 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 KIF2CQ99661 725 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 LBHD1Q9BQE6 289 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-217ENST00000556203 SEZ6LQ9BYH1 1024 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 PRO3102Q9H379 93 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 JADE2Q9NQC1 790 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
ACTN1-217ENST00000556203 KIAA0355O15063 1070 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 TLR3O15455 904 aaKnown RBP17.36■□□□□ 0.37
ACTN1-217ENST00000556203 SREBF1P36956 1147 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
ACTN1-217ENST00000556203 NLRP5P59047 1200 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 MTMR1Q13613 665 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 NBPF20Q3BBV1 942 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 METTL7BQ6UX53 244 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 BICD2Q8TD16 824 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 CDHR1Q96JP9 859 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
ACTN1-217ENST00000556203 DTNBO60941 627 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 CD4P01730 458 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 ZNF286BP0CG31 522 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 ITGB8P26012 769 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 FAM47CQ5HY64 1035 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 HABP4Q5JVS0 413 aaKnown RBP17.35■□□□□ 0.37
ACTN1-217ENST00000556203 CYP2W1Q8TAV3 490 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 RASGRP4Q8TDF6 673 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 KAT2BQ92831 832 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 BADQ92934 168 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 SENP7Q9BQF6 1050 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 MXRA8Q9BRK3 442 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 UBE2OQ9C0C9 1292 aaKnown RBP17.35■□□□□ 0.37
ACTN1-217ENST00000556203 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
ACTN1-217ENST00000556203 PKD2L1Q9P0L9 805 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 TBX21Q9UL17 535 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 STK36Q9NRP7 1315 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 KIAA1217Q5T5P2 1943 aa17.35■□□□□ 0.37
ACTN1-217ENST00000556203 NOP56O00567 594 aaKnown RBP17.34■□□□□ 0.37
ACTN1-217ENST00000556203 B4GALT4O60513 344 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 ATP9AO75110 1047 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 PPFIA4O75335 1185 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 HOXD8P13378 290 aaPredicted RBP17.34■□□□□ 0.37
ACTN1-217ENST00000556203 RAG1P15918 1043 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 KCNA2P16389 499 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 BMP8BP34820 402 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 NFRKBQ6P4R8 1299 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
ACTN1-217ENST00000556203 TRMT13Q9NUP7 481 aaKnown RBP17.34■□□□□ 0.37
ACTN1-217ENST00000556203 MAFGO15525 162 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 ZNF76P36508 570 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 SP4Q02446 784 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 CEP55Q53EZ4 464 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms