RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	GALNT17	Q6IS24	598 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	ZNF384	Q8TF68	577 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	PLVAP	Q9BX97	442 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	ADAMTS3	O15072	1205 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	OR52Z1	P0C646	297 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	ARHGAP25	P42331	645 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	KRT25	Q7Z3Z0	450 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	P2RX5	Q93086	422 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	CEP83	Q9Y592	693 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	MYL1	P05976	194 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	GRM1	Q13255	1194 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	CALCRL	Q16602	461 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	NSMF	Q6X4W1	530 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	CABS1	Q96KC9	395 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	PPAN	Q9NQ55	473 aa	Known RBP	13.51	□□□□□ -0.25
TMPO-212	ENST00000556029	CAPN11	Q9UMQ6	739 aa		13.51	□□□□□ -0.25
TMPO-212	ENST00000556029		A0A1W2PQC6	194 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	LAD1	O00515	517 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	CEP104	O60308	925 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	NPR1	P16066	1061 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	PMS1	P54277	932 aa	Known RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	KCNB1	Q14721	858 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	GRM4	Q14833	912 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	SLFN13	Q68D06	897 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	HS2ST1	Q7LGA3	356 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	ARHGEF10L	Q9HCE6	1279 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	SAMD15	Q9P1V8	674 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	BAIAP2L1	Q9UHR4	511 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	SCAF8	Q9UPN6	1271 aa	Known RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	NUP98	P52948	1817 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	MAGEA1	P43355	309 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	PSMC4	P43686	418 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	UBXN2A	P68543	259 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	SV2B	Q7L1I2	683 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	TDRD3	Q9H7E2	651 aa	Known RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	EHMT1	Q9H9B1	1298 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	TIAM2	Q8IVF5	1701 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	ATP1A1	P05023	1023 aa	Known RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	CCNE1	P24864	410 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	GUCY2F	P51841	1108 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	CYP27A1	Q02318	531 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	CNNM4	Q6P4Q7	775 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	STXBP4	Q6ZWJ1	553 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	NELFCD	Q8IXH7	590 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	SECISBP2L	Q93073	1101 aa	Known RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	RAB21	Q9UL25	225 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	ZMYND10	O75800	440 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	CALCOCO2	Q13137	446 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	LLGL1	Q15334	1064 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	AOC3	Q16853	763 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	TMCO4	Q5TGY1	634 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	C12orf60	Q5U649	245 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	NSRP1	Q9H0G5	558 aa	Known RBP	13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	ZNF408	Q9H9D4	720 aa		13.5	□□□□□ -0.25
TMPO-212	ENST00000556029	GOLGA6B	A6NDN3	693 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	MAP2K7	O14733	419 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	ZBTB22	O15209	634 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	N4BP1	O75113	896 aa	Known RBP	13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	PSMD6	Q15008	389 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	RCSD1	Q6JBY9	416 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	ADAT2	Q7Z6V5	191 aa	Known RBP	13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	GOLGA5	Q8TBA6	731 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	LZTS2	Q9BRK4	669 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	CUEDC2	Q9H467	287 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	SLC39A2	Q9NP94	309 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	AGPAT5	Q9NUQ2	364 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	L1RE1	Q9UN81	338 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	BUB1B	O60566	1050 aa	Predicted RBP	13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	RHOBTB3	O94955	611 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	LIG3	P49916	1009 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	ZBED6	P86452	979 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	RDH13	Q8NBN7	331 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	SMC6	Q96SB8	1091 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	TMEM47	Q9BQJ4	181 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	PSTPIP2	Q9H939	334 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	BARHL2	Q9NY43	387 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	PCDHA1	Q9Y5I3	950 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	MYCL	P12524	364 aa	Predicted RBP	13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	PPP1R2	P41236	205 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	TYW1B	Q6NUM6	668 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	ZNF354C	Q86Y25	554 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	FAM71B	Q8TC56	605 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	MGARP	Q8TDB4	240 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	AK8	Q96MA6	479 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	CCSER1	Q9C0I3	900 aa		13.49	□□□□□ -0.25
TMPO-212	ENST00000556029	COL1A1	P02452	1464 aa	Predicted RBP	13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	NEK8	Q86SG6	692 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	RETREG2	Q8NC44	543 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	MASTL	Q96GX5	879 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	MMS19	Q96T76	1030 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	DNAJC7	Q99615	494 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	IL17RB	Q9NRM6	502 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	PDS5A	Q29RF7	1337 aa	Known RBP	13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	SPOP	O43791	374 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	SORBS3	O60504	671 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	PCK1	P35558	622 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	KLK7	P49862	253 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 150 ms