RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TAPT1Q6NXT6 567 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 SEPT14Q6ZU15 432 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 SLFN12Q8IYM2 578 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 C4orf32Q8N8J7 132 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 GIMAP8Q8ND71 665 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-221ENST00000555773 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
SHMT2-221ENST00000555773 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-221ENST00000555773 MTMR9Q96QG7 549 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 USP28Q96RU2 1077 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 SCAND2PQ9GZW5 306 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-221ENST00000555773 KCNMB3Q9NPA1 279 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 TBC1D22BQ9NU19 505 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 TFIP11Q9UBB9 837 aaKnown RBP14.12□□□□□ -0.15
SHMT2-221ENST00000555773 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
SHMT2-221ENST00000555773 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
SHMT2-221ENST00000555773 MSH4O15457 936 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 SLC37A4O43826 429 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 ZNF865P0CJ78 1059 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 PRPHP41219 470 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 ATP2C1P98194 919 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 NEDD9Q14511 834 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 NBR1Q14596 966 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 PTPAQ15257 358 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 FOXD4L6Q3SYB3 417 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 ARL6IP4Q66PJ3 421 aaKnown RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 CCDC62Q6P9F0 684 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 FOXD4L3Q6VB84 417 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 CLEC17AQ6ZS10 378 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 FBXO16Q8IX29 292 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 LINC00301Q8NCQ3 95 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 ETNPPLQ8TBG4 499 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 RIT2Q99578 217 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 ZNF577Q9BSK1 485 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 AGO4Q9HCK5 861 aaKnown RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 DDX41Q9UJV9 622 aaKnown RBP14.11□□□□□ -0.15
SHMT2-221ENST00000555773 FAM184BQ9ULE4 1060 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 PTCH2Q9Y6C5 1203 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 MRVI1Q9Y6F6 885 aa14.11□□□□□ -0.15
SHMT2-221ENST00000555773 DOCK3Q8IZD9 2030 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 IPO5O00410 1097 aaKnown RBP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 NKRFO15226 690 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 OR52Z1P0C646 297 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 TXNP10599 105 aaKnown RBP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 ELNP15502 786 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 CEBPZQ03701 1054 aaKnown RBP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 CACNB2Q08289 660 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 SEMA3FQ13275 785 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 STK38Q15208 465 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 MAP3K21Q5TCX8 1036 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 FBXO46Q6PJ61 603 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 KCNG4Q8TDN1 519 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 HAS1Q92839 578 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 SLC5A5Q92911 643 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 TMEM60Q9H2L4 133 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 PDGFCQ9NRA1 345 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 ZHX1Q9UKY1 873 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-221ENST00000555773 NFASCO94856 1347 aa14.1□□□□□ -0.15
SHMT2-221ENST00000555773 SPTLC2O15270 562 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 PPP6R2O75170 966 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 CYBAP13498 195 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 NCLP19338 710 aaKnown RBP14.09□□□□□ -0.15
SHMT2-221ENST00000555773 PDIA5Q14554 519 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 CCDC144BQ3MJ40 725 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 DUSP28Q4G0W2 176 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 DTHD1Q6ZMT9 781 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 SDF4Q9BRK5 362 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 PCDHA12Q9UN75 941 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 Q9Y3F1 56 aa14.09□□□□□ -0.15
SHMT2-221ENST00000555773 ZNFX1Q9P2E3 1918 aaKnown RBP14.09□□□□□ -0.15
SHMT2-221ENST00000555773 PLXNB2O15031 1838 aa14.08□□□□□ -0.15
SHMT2-221ENST00000555773 DHX15O43143 795 aaKnown RBP14.08□□□□□ -0.16
SHMT2-221ENST00000555773 SEPT4O43236 478 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 GAS7O60861 476 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 ATP9AO75110 1047 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 PSMD10O75832 226 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
SHMT2-221ENST00000555773 AKR1A1P14550 325 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 KCNA2P16389 499 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 ADCYAP1R1P41586 468 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 TXKP42681 527 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 SP2Q02086 613 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 LAMC2Q13753 1193 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 LY6KQ17RY6 165 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 TMEM266Q2M3C6 531 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 LRCH2Q5VUJ6 765 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 SPATA32Q96LK8 384 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 TEKT3Q9BXF9 490 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 RAB34Q9BZG1 259 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHMT2-221ENST00000555773 TTC12Q9H892 705 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-221ENST00000555773 TCEAL9Q9UHQ7 104 aa14.08□□□□□ -0.16
SHMT2-221ENST00000555773 SRPRBQ9Y5M8 271 aaKnown RBP14.08□□□□□ -0.16
SHMT2-221ENST00000555773 ARIH2O95376 493 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms