RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 FGD4Q96M96 766 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 ZNF577Q9BSK1 485 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 MAF1Q9H063 256 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 LRWD1Q9UFC0 647 aa11.52□□□□□ -0.57
SRP54-208ENST00000555557 TBX3O15119 743 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 KINO60870 393 aaKnown RBP11.51□□□□□ -0.57
SRP54-208ENST00000555557 COBLO75128 1261 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 ADORA2AP29274 412 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 MTMR1Q13613 665 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRP54-208ENST00000555557 DHX58Q96C10 678 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 FAM20AQ96MK3 541 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
SRP54-208ENST00000555557 NUP62CLQ9H1M0 184 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 DDX19AQ9NUU7 478 aaKnown RBP11.51□□□□□ -0.57
SRP54-208ENST00000555557 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
SRP54-208ENST00000555557 SYCE3A1L190 88 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 DDX39AO00148 427 aaKnown RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 CA12O43570 354 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 ATP9AO75110 1047 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 UBA7P41226 1012 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 VEGFBP49765 207 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 STXBP2Q15833 593 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 EEPD1Q7L9B9 569 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 SLC5A5Q92911 643 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 SYAP1Q96A49 352 aaPredicted RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 IWS1Q96ST2 819 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 CLSTN2Q9H4D0 955 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 ADD3Q9UEY8 706 aaKnown RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 SERTAD1Q9UHV2 236 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 IPO5O00410 1097 aaKnown RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 CHMP2AO43633 222 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 PSMD10O75832 226 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 MAPK4P31152 587 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 SPIRE1Q08AE8 756 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 PDIA5Q14554 519 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 LRCH2Q5VUJ6 765 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 CABP7Q86V35 215 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 RASSF8Q8NHQ8 419 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 AK8Q96MA6 479 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 SDF4Q9BRK5 362 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 TNMDQ9H2S6 317 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 BCAS3Q9H6U6 928 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
SRP54-208ENST00000555557 VAV3Q9UKW4 847 aa11.5□□□□□ -0.57
SRP54-208ENST00000555557 EML1O00423 815 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 FOXN1O15353 648 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 STRNO43815 780 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 GAS7O60861 476 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 TBC1D8O95759 1140 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 EDNRBP24530 442 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 TXLNAP40222 546 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 PDE4DQ08499 809 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 ITGB3BPQ13352 177 aaPredicted RBP11.49□□□□□ -0.57
SRP54-208ENST00000555557 ECM1Q16610 540 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 ZNF792Q3KQV3 632 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 XRRA1Q6P2D8 792 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 KRBA2Q6ZNG9 492 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 SEPT14Q6ZU15 432 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 NIPA1Q7RTP0 329 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 GRAMD1CQ8IYS0 662 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 CNNM3Q8NE01 707 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 LRRC15Q8TF66 581 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
SRP54-208ENST00000555557 RAB34Q9BZG1 259 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 CCSER1Q9C0I3 900 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 LCTP09848 1927 aa11.49□□□□□ -0.57
SRP54-208ENST00000555557 A0A087WWV3 80 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 DHX15O43143 795 aaKnown RBP11.48□□□□□ -0.57
SRP54-208ENST00000555557 ACTN4O43707 911 aaKnown RBP11.48□□□□□ -0.57
SRP54-208ENST00000555557 SORBS3O60504 671 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 EIF3JO75822 258 aaKnown RBP11.48□□□□□ -0.57
SRP54-208ENST00000555557 GRB14Q14449 540 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 KRT79Q5XKE5 535 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 NLRX1Q86UT6 975 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 ABRAQ8N0Z2 381 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 STAMQ92783 540 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 UNC45AQ9H3U1 944 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 DISC1Q9NRI5 854 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 TRPA1O75762 1119 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 PLCG1P19174 1290 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 CTGFP29279 349 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 SP2Q02086 613 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 GRB10Q13322 594 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 E2F4Q16254 413 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 RRAGBQ5VZM2 374 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 GPRASP2Q96D09 838 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms