RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FBXL7Q9UJT9 491 aa6.34□□□□□ -1.39
SNX6-204ENST00000555541 TESMINQ9Y4I5 508 aa6.34□□□□□ -1.39
SNX6-204ENST00000555541 TBX1O43435 398 aa6.33□□□□□ -1.4
SNX6-204ENST00000555541 TESK1Q15569 626 aa6.33□□□□□ -1.4
SNX6-204ENST00000555541 SPDYAQ5MJ70 313 aa6.33□□□□□ -1.4
SNX6-204ENST00000555541 ZNF585AQ6P3V2 769 aa6.33□□□□□ -1.4
SNX6-204ENST00000555541 PALM2Q8IXS6 379 aa6.33□□□□□ -1.4
SNX6-204ENST00000555541 WASF3Q9UPY6 502 aa6.33□□□□□ -1.4
SNX6-204ENST00000555541 STAT5AP42229 794 aa6.32□□□□□ -1.4
SNX6-204ENST00000555541 MFAP1P55081 439 aaKnown RBP6.32□□□□□ -1.4
SNX6-204ENST00000555541 MROH9Q5TGP6 573 aa6.32□□□□□ -1.4
SNX6-204ENST00000555541 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
SNX6-204ENST00000555541 MILR1Q7Z6M3 343 aa6.32□□□□□ -1.4
SNX6-204ENST00000555541 IGDCC4Q8TDY8 1250 aa6.32□□□□□ -1.4
SNX6-204ENST00000555541 YTHDC1Q96MU7 727 aaKnown RBP6.32□□□□□ -1.4
SNX6-204ENST00000555541 AP5M1Q9H0R1 490 aa6.32□□□□□ -1.4
SNX6-204ENST00000555541 TIMM13Q9Y5L4 95 aaPredicted RBP6.32□□□□□ -1.4
SNX6-204ENST00000555541 SCG5P05408 212 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 BCL6P41182 706 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 SELENOPP49908 381 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 SF1Q15637 639 aaKnown RBP6.31□□□□□ -1.4
SNX6-204ENST00000555541 E4F1Q66K89 784 aaPredicted RBP6.31□□□□□ -1.4
SNX6-204ENST00000555541 IQCEQ6IPM2 695 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 DENND5AQ6IQ26 1287 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 CEP68Q76N32 757 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
SNX6-204ENST00000555541 ZNF575Q86XF7 245 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 RCBTB1Q8NDN9 531 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 BTN2A2Q8WVV5 523 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 PTPN18Q99952 460 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 BTG4Q9NY30 223 aa6.31□□□□□ -1.4
SNX6-204ENST00000555541 NPEPPSL1A6NEC2 478 aa6.3□□□□□ -1.4
SNX6-204ENST00000555541 TADA3O75528 432 aa6.3□□□□□ -1.4
SNX6-204ENST00000555541 NCAPHQ15003 741 aa6.3□□□□□ -1.4
SNX6-204ENST00000555541 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
SNX6-204ENST00000555541 PLEKHH3Q7Z736 793 aa6.3□□□□□ -1.4
SNX6-204ENST00000555541 CRACR2BQ8N4Y2 399 aaPredicted RBP6.3□□□□□ -1.4
SNX6-204ENST00000555541 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
SNX6-204ENST00000555541 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
SNX6-204ENST00000555541 ITGAVP06756 1048 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 HOXC12P31275 282 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
SNX6-204ENST00000555541 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
SNX6-204ENST00000555541 RBM10P98175 930 aaKnown RBP6.29□□□□□ -1.4
SNX6-204ENST00000555541 ARRDC4Q8NCT1 418 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 CPLX3Q8WVH0 158 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 ACBD3Q9H3P7 528 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 KIAA1522Q9P206 1035 aaPredicted RBP6.29□□□□□ -1.4
SNX6-204ENST00000555541 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
SNX6-204ENST00000555541 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 LRG1P02750 347 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 LCP1P13796 627 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 IL13P35225 146 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 PPP2CBP62714 309 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 PPP2CAP67775 309 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 PURAQ00577 322 aaKnown RBP6.28□□□□□ -1.4
SNX6-204ENST00000555541 PRSS53Q2L4Q9 553 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 ZC3H18Q86VM9 953 aaKnown RBP6.28□□□□□ -1.4
SNX6-204ENST00000555541 Q8TCH9 128 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 DIO2Q92813 273 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 C1orf159Q96HA4 380 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 STRIP2Q9ULQ0 834 aa6.28□□□□□ -1.4
SNX6-204ENST00000555541 MUSKO15146 869 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 ZNF623O75123 536 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 ATF4P18848 351 aaPredicted RBP6.27□□□□□ -1.41
SNX6-204ENST00000555541 HNRNPA0Q13151 305 aaKnown RBP6.27□□□□□ -1.41
SNX6-204ENST00000555541 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
SNX6-204ENST00000555541 EMC4Q5J8M3 183 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 ACBD5Q5T8D3 534 aaPredicted RBP6.27□□□□□ -1.41
SNX6-204ENST00000555541 ZNF227Q86WZ6 799 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 ANAPC16Q96DE5 110 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 TRMT2BQ96GJ1 504 aaKnown RBP6.27□□□□□ -1.41
SNX6-204ENST00000555541 TGIF2Q9GZN2 237 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 SEMA4AQ9H3S1 761 aa6.27□□□□□ -1.41
SNX6-204ENST00000555541 NGRNQ9NPE2 291 aaKnown RBP6.27□□□□□ -1.41
SNX6-204ENST00000555541 NAT2P11245 290 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 GTF2A2P52657 109 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 NKX3-2P78367 333 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 FHL2Q14192 279 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 MIIPQ5JXC2 388 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 SLFN13Q68D06 897 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 MRM1Q6IN84 353 aaKnown RBP6.26□□□□□ -1.41
SNX6-204ENST00000555541 TEPPQ6URK8 271 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 C6orf15Q6UXA7 325 aaPredicted RBP6.26□□□□□ -1.41
SNX6-204ENST00000555541 PROSER1Q86XN7 944 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 ZCCHC14Q8WYQ9 949 aaKnown RBP6.26□□□□□ -1.41
SNX6-204ENST00000555541 DTLQ9NZJ0 730 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 HSPBP1Q9NZL4 362 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
SNX6-204ENST00000555541 B2RBV5 119 aa6.25□□□□□ -1.41
SNX6-204ENST00000555541 NPIPB8E9PQR5 432 aa6.25□□□□□ -1.41
SNX6-204ENST00000555541 H7BY64 318 aa6.25□□□□□ -1.41
SNX6-204ENST00000555541 HGSO14964 777 aaPredicted RBP6.25□□□□□ -1.41
SNX6-204ENST00000555541 SMAD7O15105 426 aaKnown RBP6.25□□□□□ -1.41
SNX6-204ENST00000555541 COL6A1P12109 1028 aa6.25□□□□□ -1.41
SNX6-204ENST00000555541 ECI1P42126 302 aa6.25□□□□□ -1.41
SNX6-204ENST00000555541 GFRA1P56159 465 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms