RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SOX1O00570 391 aaPredicted RBP15.7■□□□□ 0.1
SNX6-203ENST00000555416 GGPS1O95749 300 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 IFNAR1P17181 557 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 ITGB5P18084 799 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 ADCY7P51828 1080 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 EPHB4P54760 987 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 ANAPC15P60006 121 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 NBPF20Q3BBV1 942 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 HSDL1Q3SXM5 330 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 CELF3Q5SZQ8 465 aaKnown RBP15.7■□□□□ 0.1
SNX6-203ENST00000555416 MYSM1Q5VVJ2 828 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 DHX37Q8IY37 1157 aaKnown RBP15.7■□□□□ 0.1
SNX6-203ENST00000555416 EMID1Q96A84 441 aaPredicted RBP15.7■□□□□ 0.1
SNX6-203ENST00000555416 ZNF274Q96GC6 653 aaPredicted RBP15.7■□□□□ 0.1
SNX6-203ENST00000555416 MTG1Q9BT17 334 aaPredicted RBP15.7■□□□□ 0.1
SNX6-203ENST00000555416 SLC26A6Q9BXS9 759 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 PRKAG2Q9UGJ0 569 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 TPCN1Q9ULQ1 816 aa15.7■□□□□ 0.1
SNX6-203ENST00000555416 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
SNX6-203ENST00000555416 B4GALT4O60513 344 aa15.69■□□□□ 0.1
SNX6-203ENST00000555416 ICAM3P32942 547 aa15.69■□□□□ 0.1
SNX6-203ENST00000555416 CLK2P49760 499 aaKnown RBP15.69■□□□□ 0.1
SNX6-203ENST00000555416 AK2P54819 239 aa15.69■□□□□ 0.1
SNX6-203ENST00000555416 LBHD1Q9BQE6 289 aaPredicted RBP15.69■□□□□ 0.1
SNX6-203ENST00000555416 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
SNX6-203ENST00000555416 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
SNX6-203ENST00000555416 UMODL1Q5DID0 1318 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 ATP9AO75110 1047 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 LARGE1O95461 756 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 ZNF286BP0CG31 522 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 TGFB3P10600 412 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 HOXD8P13378 290 aaPredicted RBP15.68■□□□□ 0.1
SNX6-203ENST00000555416 CHMP4BP1P59074 171 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 LAMC2Q13753 1193 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 C9orf50Q5SZB4 431 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 PPTC7Q8NI37 304 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 CYP2W1Q8TAV3 490 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 AIFM3Q96NN9 605 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 RNF26Q9BY78 433 aaPredicted RBP15.68■□□□□ 0.1
SNX6-203ENST00000555416 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 UBIAD1Q9Y5Z9 338 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 LAMA2P24043 3122 aaKnown RBP15.68■□□□□ 0.1
SNX6-203ENST00000555416 MROH7Q68CQ1 1323 aa15.68■□□□□ 0.1
SNX6-203ENST00000555416 SZT2Q5T011 3432 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 SPDYE3A6NKU9 549 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 hCG_1984214I3L0E3 225 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 FIBPO43427 364 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 KPNA6O60684 536 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 STAM2O75886 525 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 RAG1P15918 1043 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 CYP2C18P33260 490 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
SNX6-203ENST00000555416 SCRN1Q12765 414 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
SNX6-203ENST00000555416 JAKMIP3Q5VZ66 844 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 XRRA1Q6P2D8 792 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 KCNV1Q6PIU1 500 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 TDHQ8IZJ6 230 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 ZNF713Q8N859 430 aaPredicted RBP15.67■□□□□ 0.1
SNX6-203ENST00000555416 RASGRP4Q8TDF6 673 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 CTAGE1Q96RT6 745 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 ANO3Q9BYT9 981 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 ZMYND12Q9H0C1 365 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 VPS54Q9P1Q0 977 aa15.67■□□□□ 0.1
SNX6-203ENST00000555416 A0A1W2PPC1 479 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 TIMP1P01033 207 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 CYP2C9P11712 490 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 KCNA2P16389 499 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 SHHQ15465 462 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 DGKDQ16760 1214 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 FAM47CQ5HY64 1035 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 LRCH3Q96II8 777 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 KIF2CQ99661 725 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 C16orf70Q9BSU1 422 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 PKD2L1Q9P0L9 805 aa15.66■□□□□ 0.1
SNX6-203ENST00000555416 ESYT2A0FGR8 921 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 HAS3O00219 553 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 TLR3O15455 904 aaKnown RBP15.65■□□□□ 0.1
SNX6-203ENST00000555416 EDIL3O43854 480 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 PFKFB2O60825 505 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 CTDNEP1O95476 244 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 F2P00734 622 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 SREBF1P36956 1147 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 SP4Q02446 784 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 HIC1Q14526 733 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 GDF6Q6KF10 455 aaPredicted RBP15.65■□□□□ 0.1
SNX6-203ENST00000555416 C16orf59Q7L2K0 433 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 CRYGNQ8WXF5 182 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 GPRASP2Q96D09 838 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 ALG1Q9BT22 464 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
SNX6-203ENST00000555416 JADE2Q9NQC1 790 aa15.65■□□□□ 0.1
SNX6-203ENST00000555416 PPFIA4O75335 1185 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 FOSP01100 380 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms