RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RGS20O76081 388 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 GGPS1O95749 300 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
SRP54-206ENST00000555317 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 MRPS9P82933 396 aaKnown RBP13.84□□□□□ -0.19
SRP54-206ENST00000555317 ARHGAP1Q07960 439 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 ITGA7Q13683 1181 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 NEDD9Q14511 834 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 DGKDQ16760 1214 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 PPTC7Q8NI37 304 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 EMID1Q96A84 441 aaPredicted RBP13.84□□□□□ -0.19
SRP54-206ENST00000555317 SPATA33Q96N06 139 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 INPP4AQ96PE3 977 aaPredicted RBP13.84□□□□□ -0.19
SRP54-206ENST00000555317 ANO3Q9BYT9 981 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 SH3GLB2Q9NR46 395 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 TPCN1Q9ULQ1 816 aa13.84□□□□□ -0.19
SRP54-206ENST00000555317 RANBP2P49792 3224 aaKnown RBP13.84□□□□□ -0.19
SRP54-206ENST00000555317 MMP3P08254 477 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 XBP1P17861 261 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 ZNF76P36508 570 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 NLRP5P59047 1200 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 PURAQ00577 322 aaKnown RBP13.83□□□□□ -0.2
SRP54-206ENST00000555317 SCRN1Q12765 414 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 PKN1Q16512 942 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 FAM47CQ5HY64 1035 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 CELF3Q5SZQ8 465 aaKnown RBP13.83□□□□□ -0.2
SRP54-206ENST00000555317 JAKMIP3Q5VZ66 844 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 GIMAP8Q8ND71 665 aaPredicted RBP13.83□□□□□ -0.2
SRP54-206ENST00000555317 GPRASP2Q96D09 838 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 ZMYND12Q9H0C1 365 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 PDLIM7Q9NR12 457 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 TMEM39AQ9NV64 488 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 VPS54Q9P1Q0 977 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
SRP54-206ENST00000555317 SCN10AQ9Y5Y9 1956 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 SPATA31C2B4DYI2 1134 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 ICAM3P32942 547 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 MAGEA10P43363 369 aaPredicted RBP13.82□□□□□ -0.2
SRP54-206ENST00000555317 PSMC6P62333 389 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 MTMR1Q13613 665 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 WASF1Q92558 559 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 KATNAL1Q9BW62 490 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 TMEM260Q9NX78 707 aa13.82□□□□□ -0.2
SRP54-206ENST00000555317 DOCK5Q9H7D0 1870 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 RAG1P15918 1043 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 MDM2Q00987 491 aaPredicted RBP13.81□□□□□ -0.2
SRP54-206ENST00000555317 MYSM1Q5VVJ2 828 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 METTL7BQ6UX53 244 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 CYFIP1Q7L576 1253 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 FAM177A1Q8N128 213 aaPredicted RBP13.81□□□□□ -0.2
SRP54-206ENST00000555317 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
SRP54-206ENST00000555317 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
SRP54-206ENST00000555317 NOD1Q9Y239 953 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 STK36Q9NRP7 1315 aa13.81□□□□□ -0.2
SRP54-206ENST00000555317 MAFGO15525 162 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 ST18O60284 1047 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 ZNF286BP0CG31 522 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 SREBF1P36956 1147 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 RBM25P49756 843 aaKnown RBP13.8□□□□□ -0.2
SRP54-206ENST00000555317 CLK2P49760 499 aaKnown RBP13.8□□□□□ -0.2
SRP54-206ENST00000555317 CDK7P50613 346 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 ARHGAP4P98171 946 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 SP2Q02086 613 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 SP4Q02446 784 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 RABEP1Q15276 862 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 CEP55Q53EZ4 464 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 FAM126BQ8IXS8 530 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 NECAB1Q8N987 351 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 SENP7Q9BQF6 1050 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 PKD2L1Q9P0L9 805 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 ORC3Q9UBD5 711 aaPredicted RBP13.8□□□□□ -0.2
SRP54-206ENST00000555317 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
SRP54-206ENST00000555317 LTBP2Q14767 1821 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 KIAA0355O15063 1070 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 SUPT20HL2P0C7V6 817 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 ITGB5P18084 799 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 ME3Q16798 604 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 NBPF20Q3BBV1 942 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 HSDL1Q3SXM5 330 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 NFRKBQ6P4R8 1299 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 C7orf31Q8N865 590 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 MXRA8Q9BRK3 442 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 SDF4Q9BRK5 362 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 TCEAL9Q9UHQ7 104 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
SRP54-206ENST00000555317 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 PSEN2P49810 448 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms