RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-206ENST00000555046 MRVI1Q9Y6F6 885 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 MOXD2PA6NHM9 499 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 FIBPO43427 364 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 PPFIA3O75145 1194 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 CTDNEP1O95476 244 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 GH1P01241 217 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 C6orf222P0C671 652 aaPredicted RBP12.09□□□□□ -0.47
TMEM260-206ENST00000555046 SMPD1P17405 629 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
TMEM260-206ENST00000555046 ZNF76P36508 570 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 USP11P51784 963 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 NEDD9Q14511 834 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 LRRC41Q15345 812 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMEM260-206ENST00000555046 UBE2SQ16763 222 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 BLIDQ8IZY5 108 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 NSUN7Q8NE18 718 aaKnown RBP12.09□□□□□ -0.47
TMEM260-206ENST00000555046 GPRASP2Q96D09 838 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 C11orf49Q9H6J7 331 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 VPS54Q9P1Q0 977 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 FRMPD4Q14CM0 1322 aa12.09□□□□□ -0.47
TMEM260-206ENST00000555046 MGAMO43451 1857 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 BAZ2BQ9UIF8 2168 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 SPATA31C2B4DYI2 1134 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 PGK1P00558 417 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 SYN1P17600 705 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 ICAM3P32942 547 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 SREBF1P36956 1147 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 FSCN1Q16658 493 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 ZNF697Q5TEC3 545 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 JAKMIP3Q5VZ66 844 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 ANO1Q5XXA6 986 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 KRT25Q7Z3Z0 450 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 TLK2Q86UE8 772 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 ALYREFQ86V81 257 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 DHX37Q8IY37 1157 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 DAGLBQ8NCG7 672 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 KLHDC9Q8NEP7 349 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 INPP4AQ96PE3 977 aaPredicted RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 NAP1L4Q99733 375 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 SENP7Q9BQF6 1050 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 UBE2OQ9C0C9 1292 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 RTEL1Q9NZ71 1219 aa12.08□□□□□ -0.48
TMEM260-206ENST00000555046 DDX41Q9UJV9 622 aaKnown RBP12.08□□□□□ -0.48
TMEM260-206ENST00000555046 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 LARGE1O95461 756 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 CYP3A4P08684 503 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 ARHGAP4P98171 946 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 MTMR1Q13613 665 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 KCNA10Q16322 511 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 CEP55Q53EZ4 464 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 GJC2Q5T442 439 aaPredicted RBP12.07□□□□□ -0.48
TMEM260-206ENST00000555046 NIPA1Q7RTP0 329 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 OR6J1Q8NGC5 347 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 EMID1Q96A84 441 aaPredicted RBP12.07□□□□□ -0.48
TMEM260-206ENST00000555046 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 GLT1D1Q96MS3 346 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 MXRA8Q9BRK3 442 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 PHF20Q9BVI0 1012 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 SENP6Q9GZR1 1112 aaPredicted RBP12.07□□□□□ -0.48
TMEM260-206ENST00000555046 JADE2Q9NQC1 790 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 ELP1O95163 1332 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 DNAH12Q6ZR08 3092 aa12.07□□□□□ -0.48
TMEM260-206ENST00000555046 ZDBF2Q9HCK1 2354 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.06□□□□□ -0.48
TMEM260-206ENST00000555046 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 PPFIA4O75335 1185 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 FDPSP14324 419 aaKnown RBP12.06□□□□□ -0.48
TMEM260-206ENST00000555046 ACLYP53396 1101 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 MRPS9P82933 396 aaKnown RBP12.06□□□□□ -0.48
TMEM260-206ENST00000555046 NONOQ15233 471 aaKnown RBP eCLIP12.06□□□□□ -0.48
TMEM260-206ENST00000555046 DGKDQ16760 1214 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 LY6KQ17RY6 165 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 CELF3Q5SZQ8 465 aaKnown RBP12.06□□□□□ -0.48
TMEM260-206ENST00000555046 MYLIPQ8WY64 445 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 PHF24Q9UPV7 400 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 UBIAD1Q9Y5Z9 338 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
TMEM260-206ENST00000555046 SYNRGQ9UMZ2 1314 aa12.06□□□□□ -0.48
TMEM260-206ENST00000555046 A6NJR5 290 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 MEIS1O00470 390 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 NOP56O00567 594 aaKnown RBP12.05□□□□□ -0.48
TMEM260-206ENST00000555046 JAK2O60674 1132 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 RGS20O76081 388 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms