RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CCDC103	Q8IW40	242 aa		7.61	□□□□□ -1.19
PSMC6-208	ENST00000554956	TMEM145	Q8NBT3	493 aa		7.61	□□□□□ -1.19
PSMC6-208	ENST00000554956	SLC38A3	Q99624	504 aa		7.61	□□□□□ -1.19
PSMC6-208	ENST00000554956	SGPP1	Q9BX95	441 aa		7.61	□□□□□ -1.19
PSMC6-208	ENST00000554956	GOLGA2P5	Q9HBQ8	144 aa		7.61	□□□□□ -1.19
PSMC6-208	ENST00000554956	PDLIM7	Q9NR12	457 aa		7.61	□□□□□ -1.19
PSMC6-208	ENST00000554956	IQGAP1	P46940	1657 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	PTPN23	Q9H3S7	1636 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	AGRP	O00253	132 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	ETV2	O00321	342 aa	Predicted RBP	7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	MPO	P05164	745 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	VIPR1	P32241	457 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	GFRA1	P56159	465 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	CORO7	P57737	925 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	SERINC3	Q13530	473 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	SF3A1	Q15459	793 aa	Known RBP	7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	DENND5A	Q6IQ26	1287 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	RPTN	Q6XPR3	784 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	SPATC1	Q76KD6	591 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	KREMEN2	Q8NCW0	462 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	SREK1	Q8WXA9	508 aa	Known RBP	7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	ARMC5	Q96C12	935 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	DNAJC2	Q99543	621 aa	Known RBP	7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	RXFP1	Q9HBX9	757 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	ARHGEF4	Q9NR80	690 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	KLHL14	Q9P2G3	628 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	HCFC2	Q9Y5Z7	792 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	EID1	Q9Y6B2	187 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	CEP152	O94986	1710 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	NOS1	P29475	1434 aa		7.6	□□□□□ -1.19
PSMC6-208	ENST00000554956	TMEM94	Q12767	1356 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	ANKRD30A	Q9BXX3	1397 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	UBR1	Q8IWV7	1749 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	TRBV23OR9-2	A0A075B6M9	112 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956		A0A1W2PQJ5	194 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	PDPK1	O15530	556 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	SCG5	P05408	212 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	DBH	P09172	617 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	C1QTNF9	P0C862	333 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	KCNA6	P17658	529 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	HOXC12	P31275	282 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	YBX1	P67809	324 aa	Known RBP	7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	RBL2	Q08999	1139 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	FAM50A	Q14320	339 aa	Known RBP	7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	NBPF6	Q5VWK0	638 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	PMFBP1	Q8TBY8	1022 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	C1orf159	Q96HA4	380 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	NBPF4	Q96M43	638 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	MMP19	Q99542	508 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	IER2	Q9BTL4	223 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	BTG4	Q9NY30	223 aa		7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	ZC3H13	Q5T200	1668 aa	Known RBP	7.59	□□□□□ -1.19
PSMC6-208	ENST00000554956	LMTK2	Q8IWU2	1503 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	NPHS1	O60500	1241 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	SRSF3	P84103	164 aa	Known RBP	7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	PKN1	Q16512	942 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	PLEKHN1	Q494U1	663 aa	Predicted RBP	7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	TMEM132E	Q6IEE7	984 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	TMC6	Q7Z403	805 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	PPIL6	Q8IXY8	311 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	LZTR1	Q8N653	840 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	NLGN2	Q8NFZ4	835 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	DPF3	Q92784	378 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	KCNN1	Q92952	543 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	MTA3	Q9BTC8	594 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	SIRPG	Q9P1W8	387 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	PFDN2	Q9UHV9	154 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	SYNM	O15061	1565 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	KANK1	Q14678	1352 aa		7.58	□□□□□ -1.2
PSMC6-208	ENST00000554956	PIK3C2B	O00750	1634 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	FAM221B	A6H8Z2	402 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	MEFV	O15553	781 aa	Predicted RBP	7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	PEX10	O60683	326 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	TSPAN15	O95858	294 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	LCP1	P13796	627 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	MTERF2	Q49AM1	385 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	PPP1R16B	Q96T49	567 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	AARSD1	Q9BTE6	412 aa	Known RBP	7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	GCM1	Q9NP62	436 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	MBD1	Q9UIS9	605 aa	Predicted RBP	7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	FBXL7	Q9UJT9	491 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	PLA2G2D	Q9UNK4	145 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	TET3	O43151	1660 aa		7.57	□□□□□ -1.2
PSMC6-208	ENST00000554956	ADGRL2	O95490	1459 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	FAM135B	Q49AJ0	1406 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	ANKRD50	Q9ULJ7	1429 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	TEX51	A0A1B0GUA7	166 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	ZC3H12D	A2A288	527 aa	Known RBP	7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	SRGAP3	O43295	1099 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	DLX3	O60479	287 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	DIAPH1	O60610	1272 aa	Known RBP	7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	CP	P00450	1065 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	FUCA1	P04066	466 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	TMEM253	P0C7T8	217 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	GLI4	P10075	376 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	EPHB3	P54753	998 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	DLG4	P78352	724 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms