RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 VSNL1P62760 191 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 KIF4BQ2VIQ3 1234 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 CLEC10AQ8IUN9 316 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 LRRC27Q9C0I9 530 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 DHX36Q9H2U1 1008 aaKnown RBP14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 MYH10P35580 1976 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 USP17L10C9JJH3 530 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 RPS6KA5O75582 802 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 JAG1P78504 1218 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 LRRC47Q8N1G4 583 aaKnown RBP14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 MMGT1Q8N4V1 131 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 CUL5Q93034 780 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 GANQ9H2C0 597 aa14.03□□□□□ -0.16
PPP4R3A-206ENST00000554943 KDM3AQ9Y4C1 1321 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 HMGB2P26583 209 aaKnown RBP14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 STRIP1Q5VSL9 837 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 PDXDC1Q6P996 788 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 PODNQ7Z5L7 613 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 PLIN2Q99541 437 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 DDX25Q9UHL0 483 aaKnown RBP14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 SALL4Q9UJQ4 1053 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 FBXL5Q9UKA1 691 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 LCTP09848 1927 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 MYH11P35749 1972 aa14.02□□□□□ -0.16
PPP4R3A-206ENST00000554943 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 CYP11B2P19099 503 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 SREBF1P36956 1147 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 ASIC1P78348 528 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 GHRHRQ02643 423 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 EDRF1Q3B7T1 1238 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 MCTP2Q6DN12 878 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 SCFD1Q8WVM8 642 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 MMS19Q96T76 1030 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 MXD3Q9BW11 206 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 ARFGAP3Q9NP61 516 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 SERPINA10Q9UK55 444 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 CLSTN1O94985 981 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 PLEKP08567 350 aaPredicted RBP14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 SLC15A2Q16348 729 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 TFR2Q9UP52 801 aa14.02□□□□□ -0.17
PPP4R3A-206ENST00000554943 IGLV3-22A0A075B6J6 115 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 DDTLA6NHG4 134 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 TXKP42681 527 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 CRKP46108 304 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 TBC1D8BQ0IIM8 1120 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 RRP1BQ14684 758 aaKnown RBP14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 SOGA3Q5TF21 947 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 STYK1Q6J9G0 422 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 EHBP1Q8NDI1 1231 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 NOC4LQ9BVI4 516 aaKnown RBP14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 TSGA10Q9BZW7 698 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 SLC39A2Q9NP94 309 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 USP40Q9NVE5 1235 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 DUSP10Q9Y6W6 482 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 UBE2SQ16763 222 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 STRA6Q9BX79 667 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 ZNF536O15090 1300 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 ZMYM2Q9UBW7 1377 aa14.01□□□□□ -0.17
PPP4R3A-206ENST00000554943 SMC1AQ14683 1233 aaKnown RBP14□□□□□ -0.17
PPP4R3A-206ENST00000554943 MASTLQ96GX5 879 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 NT5C3AQ9H0P0 336 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 SNX12Q9UMY4 172 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 PLA2G6O60733 806 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 MED24O75448 989 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 MAP3K10Q02779 954 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 QRICH1Q2TAL8 776 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 NCAPH2Q6IBW4 605 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 CCDC84Q86UT8 332 aaPredicted RBP14□□□□□ -0.17
PPP4R3A-206ENST00000554943 FIZ1Q96SL8 496 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 HDAC6Q9UBN7 1215 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 MYBP10242 640 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 ALDH1B1P30837 517 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 PPP4R3CPQ6ZMV5 832 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 AENQ8WTP8 325 aaKnown RBP14□□□□□ -0.17
PPP4R3A-206ENST00000554943 KCNQ5Q9NR82 932 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 CEP72Q9P209 647 aa14□□□□□ -0.17
PPP4R3A-206ENST00000554943 CYLC1P35663 651 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 MUM1L1Q5H9M0 696 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 TEX35Q5T0J7 233 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 TEKT1Q969V4 418 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 JAKMIP2Q96AA8 810 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 PCDHA13Q9Y5I0 950 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 SAR1BQ9Y6B6 198 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 CAPN6Q9Y6Q1 641 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 SYF2O95926 243 aaKnown RBP13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 JAM2P57087 298 aa13.99□□□□□ -0.17
PPP4R3A-206ENST00000554943 GIT2Q14161 759 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms