RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MOXD2PA6NHM9 499 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 RBAK-RBAKDNI3L0D1 243 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 EVI5O60447 810 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 ATP9AO75110 1047 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 SYN1P17600 705 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 FOSBP53539 338 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 SNX17Q15036 470 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 SPC25Q9HBM1 224 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 STARD7Q9NQZ5 370 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-214ENST00000554928 LIMCH1Q9UPQ0 1083 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 ATP11BQ9Y2G3 1177 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
SYNE2-214ENST00000554928 STK36Q9NRP7 1315 aa14.15□□□□□ -0.15
SYNE2-214ENST00000554928 A6NJR5 290 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 SPATA31C2B4DYI2 1134 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 NKRFO15226 690 aaKnown RBP eCLIP14.14□□□□□ -0.15
SYNE2-214ENST00000554928 GGPS1O95749 300 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 GH1P01241 217 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 MYL3P08590 195 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 ICAM3P32942 547 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 NLRP5P59047 1200 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 RABEP1Q15276 862 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
SYNE2-214ENST00000554928 PCSK9Q8NBP7 692 aaKnown RBP14.14□□□□□ -0.15
SYNE2-214ENST00000554928 CRYGNQ8WXF5 182 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 UIMC1Q96RL1 719 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 C6orf50Q9HD87 102 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
SYNE2-214ENST00000554928 M0R2N6 131 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 MMP3P08254 477 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 ARP10275 920 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 SREBF1P36956 1147 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 PURAQ00577 322 aaKnown RBP14.13□□□□□ -0.15
SYNE2-214ENST00000554928 TLE2Q04725 743 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 AP3B2Q13367 1082 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 HSDL1Q3SXM5 330 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 CELF3Q5SZQ8 465 aaKnown RBP14.13□□□□□ -0.15
SYNE2-214ENST00000554928 MYSM1Q5VVJ2 828 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 REXO1Q8N1G1 1221 aaKnown RBP14.13□□□□□ -0.15
SYNE2-214ENST00000554928 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 UPF2Q9HAU5 1272 aaKnown RBP14.13□□□□□ -0.15
SYNE2-214ENST00000554928 SH3GLB2Q9NR46 395 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
SYNE2-214ENST00000554928 FAM86B1E9PN63 330 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 FIBPO43427 364 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 PQBP1O60828 265 aaKnown RBP14.12□□□□□ -0.15
SYNE2-214ENST00000554928 CDKL5O76039 1030 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 FOSP01100 380 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-214ENST00000554928 FAM86B2P0C5J1 330 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 KCNA2P16389 499 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 CDK7P50613 346 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 XRRA1Q6P2D8 792 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 CYFIP1Q7L576 1253 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
SYNE2-214ENST00000554928 CCDC148Q8NFR7 591 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 CCDC12Q8WUD4 166 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-214ENST00000554928 KAT2BQ92831 832 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 GLT1D1Q96MS3 346 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 MXRA8Q9BRK3 442 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 ALG1Q9BT22 464 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 PHF20Q9BVI0 1012 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 JADE2Q9NQC1 790 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
SYNE2-214ENST00000554928 TRIM43BA6NCK2 446 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 ARVCFO00192 962 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 STAM2O75886 525 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 ZNF286BP0CG31 522 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 ITGB8P26012 769 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 GNA11P29992 359 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 CPT1AP50416 773 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 SP4Q02446 784 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 ITGA7Q13683 1181 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 LAMC2Q13753 1193 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 GNPTABQ3T906 1256 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 EARS2Q5JPH6 523 aaKnown RBP14.11□□□□□ -0.15
SYNE2-214ENST00000554928 PRPF38BQ5VTL8 546 aaKnown RBP14.11□□□□□ -0.15
SYNE2-214ENST00000554928 C1orf53Q5VUE5 145 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 BLIDQ8IZY5 108 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 SLC43A3Q8NBI5 491 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 EMID1Q96A84 441 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-214ENST00000554928 TRIM43Q96BQ3 446 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-214ENST00000554928 GPRASP2Q96D09 838 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 SPATA33Q96N06 139 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 GLT8D2Q9H1C3 349 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 PDLIM7Q9NR12 457 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 ELP1O95163 1332 aa14.11□□□□□ -0.15
SYNE2-214ENST00000554928 IGLV3-22A0A075B6J6 115 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-214ENST00000554928 ZEB2O60315 1214 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 TGFB3P10600 412 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 CHMP4BP1P59074 171 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 ITGB3BPQ13352 177 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-214ENST00000554928 MTMR1Q13613 665 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 CEP55Q53EZ4 464 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms