RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CCDC50Q8IVM0 306 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 MYCT1Q8N699 235 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 U2AF1L4Q8WU68 220 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 RUBCNQ92622 972 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 USP40Q9NVE5 1235 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CEP72Q9P209 647 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 PARP2Q9UGN5 583 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 LRRC53A6NM62 1247 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 FTCDO95954 541 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 ABCB4P21439 1286 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 GBP2P32456 591 aaPredicted RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 NF2P35240 595 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 GGCXP38435 758 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CYP4A11Q02928 519 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PDCLQ13371 301 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CUL1Q13616 776 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PRR16Q569H4 304 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SLFN13Q68D06 897 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 TRAPPC11Q7Z392 1133 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 TMC4Q7Z404 712 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 TMEM139Q8IV31 216 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 GPATCH11Q8N954 259 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 LRRN4CLQ8ND94 238 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PNKPQ96T60 521 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CD209Q9NNX6 404 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 FAM114A2Q9NRY5 505 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 NFU1Q9UMS0 254 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.26□□□□□ -1.73
KTN1-217ENST00000554831 PDS5AQ29RF7 1337 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 RIMBP2O15034 1052 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SART1O43290 800 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 CAMTA2O94983 1202 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PLA2G4BP0C869 781 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 IBSPP21815 317 aaPredicted RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 ATP5DP30049 168 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 ALDH3A1P30838 453 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 EIF3BP55884 814 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 PPP4CP60510 307 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CDK17Q00537 523 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SLC7A5Q01650 507 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 MMS22LQ6ZRQ5 1243 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PNMA8AQ86V59 439 aaPredicted RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 FBXO11Q86XK2 927 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CHURC1Q8WUH1 139 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 RIN2Q8WYP3 895 aaPredicted RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 IFT74Q96LB3 600 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 DNAJC7Q99615 494 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SELENOSQ9BQE4 189 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 NKIRAS1Q9NYS0 192 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 THRAP3Q9Y2W1 955 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 MYH10P35580 1976 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PNMA6FA0A0J9YX94 578 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 POTEMA6NI47 508 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PPP1R37O75864 691 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SASH3O75995 380 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 NTSR2O95665 410 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CFBP00751 764 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 AFPP02771 609 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 LMNB1P20700 586 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CTNNA2P26232 953 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 C2orf54Q08AI8 447 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 KCNH2Q12809 1159 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 BIRC3Q13489 604 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PPP1R7Q15435 360 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SLC18A3Q16572 532 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 FAM98CQ17RN3 349 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 NAALADL2Q58DX5 795 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 ZNF365Q70YC5 407 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 TAOK1Q7L7X3 1001 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 CCDC105Q8IYK2 499 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 MMGT1Q8N4V1 131 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 MAGOHBQ96A72 148 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 CEP95Q96GE4 821 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 RBM17Q96I25 401 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 PLCD4Q9BRC7 762 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 LRRC1Q9BTT6 524 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 PLEKHA4Q9H4M7 779 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SMIM23A6NLE4 172 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 FOXP2O15409 715 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 GAS7O60861 476 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 FCER1AP12319 257 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 IRX5P78411 483 aaPredicted RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 PLCB3Q01970 1234 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 IFT88Q13099 833 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 DENND2CQ68D51 928 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 MSL1Q68DK7 614 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 FAM133AQ8N9E0 248 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 SH2D4AQ9H788 454 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 ASIC3Q9UHC3 531 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 NWD1Q149M9 1564 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 C3P01024 1663 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 A0A1W2PQJ5 194 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 A0A1W2PRG0 241 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 TRIM66O15016 1216 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 DHX9Q08211 1270 aaKnown RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 GRAPQ13588 217 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 ARHGAP44Q17R89 818 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 EDRF1Q3B7T1 1238 aa4.26□□□□□ -1.73
KTN1-217ENST00000554831 DPP8Q6V1X1 898 aaPredicted RBP4.26□□□□□ -1.73
KTN1-217ENST00000554831 FAM186BQ8IYM0 893 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms