RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 KIAA0825Q8IV33 1275 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 RETREG2Q8NC44 543 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 C11orf49Q9H6J7 331 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 PPP2R3BQ9Y5P8 575 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 CEMIPQ8WUJ3 1361 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 CLRN2A0PK11 232 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 BTBD19C9JJ37 291 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 DIAPH1O60610 1272 aaKnown RBP7.36□□□□□ -1.23
ATXN3-226ENST00000554350 NEFMP07197 916 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 CETPP11597 493 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 DLGAP5Q15398 846 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 PLD6Q8N2A8 252 aaKnown RBP7.36□□□□□ -1.23
ATXN3-226ENST00000554350 FAM181AQ8N9Y4 354 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 ASB2Q96Q27 587 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 LRFN3Q9BTN0 628 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 ATXN3LQ9H3M9 355 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 GABRQQ9UN88 632 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 SLC5A6Q9Y289 635 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 CSADQ9Y600 493 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 MUC6Q6W4X9 2439 aa7.36□□□□□ -1.23
ATXN3-226ENST00000554350 LAMA2P24043 3122 aaKnown RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 MYO3BQ8WXR4 1341 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 ADGRA2Q96PE1 1338 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 MYO1BO43795 1136 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 LEFTY1O75610 366 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 JUNBP17275 347 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 RPS8P62241 208 aaKnown RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 MRPS5P82675 430 aaKnown RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 BNIP3Q12983 259 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 TTLL4Q14679 1199 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 TMEM31Q5JXX7 168 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 DACT2Q5SW24 774 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 NLRP10Q86W26 655 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 SMYD4Q8IYR2 804 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 POU5F2Q8N7G0 328 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 ATXN2LQ8WWM7 1075 aaKnown RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 THUMPD2Q9BTF0 503 aaKnown RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.35□□□□□ -1.231e-11■■■■□ 25.2
ATXN3-226ENST00000554350 TTYH1Q9H313 450 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-226ENST00000554350 MIS18AQ9NYP9 233 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 THEGQ9P2T0 379 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 PSME4Q14997 1843 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 NCOR1O75376 2440 aa7.35□□□□□ -1.23
ATXN3-226ENST00000554350 SOWAHDA6NJG2 315 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 SLFN14P0C7P3 912 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 SNAPC2Q13487 334 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 VGLL4Q14135 290 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 DSC3Q14574 896 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 CYP27C1Q4G0S4 372 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 HSP90AB3PQ58FF7 597 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 C17orf99Q6UX52 265 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 DTHD1Q6ZMT9 781 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 ZBTB38Q8NAP3 1195 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-226ENST00000554350 ASIC4Q96FT7 647 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 NECAB3Q96P71 396 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-226ENST00000554350 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 TMEM39AQ9NV64 488 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 CACNA2D2Q9NY47 1150 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 PODXL2Q9NZ53 605 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 MUC3AQ02505 3323 aa7.34□□□□□ -1.23
ATXN3-226ENST00000554350 OTOFQ9HC10 1997 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 ZNF804BA4D1E1 1349 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 COL2A1P02458 1487 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-226ENST00000554350 FLT3LGP49771 235 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 AIMP1Q12904 312 aaKnown RBP7.33□□□□□ -1.24
ATXN3-226ENST00000554350 DCTN1Q14203 1278 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 ZNF792Q3KQV3 632 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 ZC3H12AQ5D1E8 599 aaKnown RBP7.33□□□□□ -1.24
ATXN3-226ENST00000554350 STRIP1Q5VSL9 837 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 PANK3Q9H999 370 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 PIDD1Q9HB75 910 aa7.33□□□□□ -1.24
ATXN3-226ENST00000554350 ZCCHC17Q9NP64 241 aaKnown RBP7.33□□□□□ -1.24
ATXN3-226ENST00000554350 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-226ENST00000554350 FAM86C2PA6NEL3 165 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 F8W031 263 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-226ENST00000554350 PDHXO00330 501 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 CD8BP10966 210 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 CD96P40200 585 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 MMP14P50281 582 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 RBM5P52756 815 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATXN3-226ENST00000554350 JAG1P78504 1218 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 ZNF252P-AS1Q0IIN9 211 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 FZD5Q13467 585 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 RASA3Q14644 834 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 PLCL1Q15111 1095 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 TTLL5Q6EMB2 1281 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 STK11IPQ8N1F8 1099 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 C3orf58Q8NDZ4 430 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 NETO1Q8TDF5 533 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 ISL2Q96A47 359 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 FAM89AQ96GI7 184 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 EPHX3Q9H6B9 360 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-226ENST00000554350 ADAMTS6Q9UKP5 1117 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms