RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 LRRC8DQ7L1W4 858 aa21.69■■□□□ 1.06
CPSF2-203ENST00000554290 TMTC2Q8N394 836 aa21.69■■□□□ 1.06
CPSF2-203ENST00000554290 PIBF1Q8WXW3 757 aa21.69■■□□□ 1.06
CPSF2-203ENST00000554290 RRP36Q96EU6 259 aaKnown RBP21.69■■□□□ 1.06
CPSF2-203ENST00000554290 SORBS3O60504 671 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 STAM2O75886 525 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 DDAH1O94760 285 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 CA3P07451 260 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 CKBP12277 381 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 UBA1P22314 1058 aaKnown RBP21.68■■□□□ 1.06
CPSF2-203ENST00000554290 CCDC85BQ15834 202 aaPredicted RBP21.68■■□□□ 1.06
CPSF2-203ENST00000554290 GNPTABQ3T906 1256 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 HERC6Q8IVU3 1022 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 ZNF654Q8IZM8 581 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 DHX38Q92620 1227 aaKnown RBP21.68■■□□□ 1.06
CPSF2-203ENST00000554290 LZTS2Q9BRK4 669 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 SPZ1Q9BXG8 430 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 LY9Q9HBG7 655 aa21.68■■□□□ 1.06
CPSF2-203ENST00000554290 PRC1O43663 620 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 SMARCA1P28370 1054 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 MCM5P33992 734 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 GNAQP50148 359 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 SP2Q02086 613 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 NFXL1Q6ZNB6 911 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 ATXN2LQ8WWM7 1075 aaKnown RBP21.67■■□□□ 1.06
CPSF2-203ENST00000554290 CUL5Q93034 780 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 ZFP91Q96JP5 570 aaPredicted RBP21.67■■□□□ 1.06
CPSF2-203ENST00000554290 SEC63Q9UGP8 760 aaKnown RBP21.67■■□□□ 1.06
CPSF2-203ENST00000554290 EYSQ5T1H1 3165 aa21.67■■□□□ 1.06
CPSF2-203ENST00000554290 CCDC69A6NI79 296 aa21.66■■□□□ 1.06
CPSF2-203ENST00000554290 CNKSR3Q6P9H4 555 aa21.66■■□□□ 1.06
CPSF2-203ENST00000554290 TMEM87BQ96K49 555 aa21.66■■□□□ 1.06
CPSF2-203ENST00000554290 TSPYL2Q9H2G4 693 aaPredicted RBP21.66■■□□□ 1.06
CPSF2-203ENST00000554290 PRDM6Q9NQX0 595 aa21.66■■□□□ 1.06
CPSF2-203ENST00000554290 THEGQ9P2T0 379 aa21.66■■□□□ 1.06
CPSF2-203ENST00000554290 SCN5AQ14524 2016 aa21.66■■□□□ 1.06
CPSF2-203ENST00000554290 GBF1Q92538 1859 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 TANC1Q9C0D5 1861 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 NOP56O00567 594 aaKnown RBP21.65■■□□□ 1.06
CPSF2-203ENST00000554290 CALM1P0DP23 149 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 CALM2P0DP24 149 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 CALM3P0DP25 149 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 NEDD9Q14511 834 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 GPNMBQ14956 572 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 SMARCC2Q8TAQ2 1214 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 INPP4AQ96PE3 977 aaPredicted RBP21.65■■□□□ 1.06
CPSF2-203ENST00000554290 C16orf70Q9BSU1 422 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 MYL10Q9BUA6 226 aa21.65■■□□□ 1.06
CPSF2-203ENST00000554290 LSG1Q9H089 658 aaKnown RBP21.65■■□□□ 1.06
CPSF2-203ENST00000554290 PRUNE2Q8WUY3 3088 aa21.64■■□□□ 1.06
CPSF2-203ENST00000554290 FRMPD4Q14CM0 1322 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 ABHD14A-ACY1A0A1B0GW23 586 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 H3BRB1 525 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 TLL1O43897 1013 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 CXCL10P02778 98 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 ICAM3P32942 547 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 MRPS9P82933 396 aaKnown RBP21.64■■□□□ 1.05
CPSF2-203ENST00000554290 XRRA1Q6P2D8 792 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 GPKOWQ92917 476 aaPredicted RBP eCLIP21.64■■□□□ 1.05
CPSF2-203ENST00000554290 ESYT1Q9BSJ8 1104 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 ZBED2Q9BTP6 218 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 TUT1Q9H6E5 874 aaKnown RBP21.64■■□□□ 1.05
CPSF2-203ENST00000554290 CDH23Q9H251 3354 aa21.64■■□□□ 1.05
CPSF2-203ENST00000554290 SPATA31C2B4DYI2 1134 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 SLC27A2O14975 620 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 FIBPO43427 364 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 GTPBP6O43824 516 aaPredicted RBP21.63■■□□□ 1.05
CPSF2-203ENST00000554290 NBNO60934 754 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 EFCAB14O75071 495 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 WDR5P61964 334 aaKnown RBP21.63■■□□□ 1.05
CPSF2-203ENST00000554290 ZNF200P98182 395 aaPredicted RBP21.63■■□□□ 1.05
CPSF2-203ENST00000554290 TAP1Q03518 808 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 IKBKEQ14164 716 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 TRIM71Q2Q1W2 868 aaKnown RBP21.63■■□□□ 1.05
CPSF2-203ENST00000554290 USP26Q9BXU7 913 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 RTEL1Q9NZ71 1219 aa21.63■■□□□ 1.05
CPSF2-203ENST00000554290 C17orf102A2RUQ5 167 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 PIK3CDO00329 1044 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 SH2B2O14492 632 aaPredicted RBP21.62■■□□□ 1.05
CPSF2-203ENST00000554290 LIFRP42702 1097 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 MRPS5P82675 430 aaKnown RBP21.62■■□□□ 1.05
CPSF2-203ENST00000554290 ZNF618Q5T7W0 954 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 PCNX4Q63HM2 1172 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 USP17L6PQ6QN14 398 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 METTL7BQ6UX53 244 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 SERINC5Q86VE9 423 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 MICALL1Q8N3F8 863 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 ASB2Q96Q27 587 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 CERS4Q9HA82 394 aa21.62■■□□□ 1.05
CPSF2-203ENST00000554290 EMSYQ7Z589 1322 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 MEIS2O14770 477 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 LGALS2P05162 132 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 POU3F3P20264 500 aaPredicted RBP21.61■■□□□ 1.05
CPSF2-203ENST00000554290 CREB3L3Q68CJ9 461 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 CYFIP1Q7L576 1253 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 NLRX1Q86UT6 975 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 SRBD1Q8N5C6 995 aaKnown RBP21.61■■□□□ 1.05
CPSF2-203ENST00000554290 ARNTL2Q8WYA1 636 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 ATP6V0A1Q93050 837 aa21.61■■□□□ 1.05
CPSF2-203ENST00000554290 ANO2Q9NQ90 1003 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms