RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 NT5C2P49902 561 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 DGKDQ16760 1214 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 EPC2Q52LR7 807 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
ABCD4-220ENST00000553998 ZNF618Q5T7W0 954 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.02□□□□□ -0.97
ABCD4-220ENST00000553998 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 BANK1Q8NDB2 785 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 TOP1MTQ969P6 601 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 MFSD14AQ96MC6 490 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 UIMC1Q96RL1 719 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.97
ABCD4-220ENST00000553998 IL25Q9H293 177 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 INCENPQ9NQS7 918 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 HDAC6Q9UBN7 1215 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
ABCD4-220ENST00000553998 EMSYQ7Z589 1322 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 LCTP09848 1927 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 DMDP11532 3685 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 TET1Q8NFU7 2136 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 H3BQ06 376 aaPredicted RBP9.01□□□□□ -0.97
ABCD4-220ENST00000553998 REC8O95072 547 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 F2P00734 622 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 AMHP03971 560 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 TOP1P11387 765 aaKnown RBP9.01□□□□□ -0.97
ABCD4-220ENST00000553998 PCP11498 1178 aaKnown RBP9.01□□□□□ -0.97
ABCD4-220ENST00000553998 IRS1P35568 1242 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 PSEN2P49810 448 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 SCN5AQ14524 2016 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 SMAD2Q15796 467 aaKnown RBP9.01□□□□□ -0.97
ABCD4-220ENST00000553998 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 PLEKHG4Q58EX7 1191 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 TCEAL5Q5H9L2 206 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 C7orf31Q8N865 590 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 DBF4BQ8NFT6 615 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 MAP4K1Q92918 833 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 WNT8BQ93098 351 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 CHMP4CQ96CF2 233 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 TTC14Q96N46 770 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 IWS1Q96ST2 819 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 TMEM47Q9BQJ4 181 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 KATNAL1Q9BW62 490 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 NSUN3Q9H649 340 aaKnown RBP9.01□□□□□ -0.97
ABCD4-220ENST00000553998 DDX41Q9UJV9 622 aaKnown RBP9.01□□□□□ -0.97
ABCD4-220ENST00000553998 MYO15AQ9UKN7 3530 aa9.01□□□□□ -0.97
ABCD4-220ENST00000553998 C5orf67F2Z3F1 127 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 RANBP6O60518 1105 aaKnown RBP9□□□□□ -0.97
ABCD4-220ENST00000553998 PPFIA4O75335 1185 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 PDHBP11177 359 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 HOXC8P31273 242 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 ZNF543Q08ER8 600 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 GPM6BQ13491 265 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 LAMC2Q13753 1193 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 MFSD10Q14728 455 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 STXBP2Q15833 593 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 PKN1Q16512 942 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 IMMTQ16891 758 aaKnown RBP9□□□□□ -0.97
ABCD4-220ENST00000553998 CCDC96Q2M329 555 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 SERINC5Q86VE9 423 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 TMEM192Q8IY95 271 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 PPTC7Q8NI37 304 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 NSUN6Q8TEA1 469 aaKnown RBP9□□□□□ -0.97
ABCD4-220ENST00000553998 LSG1Q9H089 658 aaKnown RBP9□□□□□ -0.97
ABCD4-220ENST00000553998 RNF41Q9H4P4 317 aaPredicted RBP9□□□□□ -0.97
ABCD4-220ENST00000553998 ANO2Q9NQ90 1003 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 COL4A6Q14031 1691 aa9□□□□□ -0.97
ABCD4-220ENST00000553998 MYH6P13533 1939 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 LAMA4Q16363 1823 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 RSPH10B2B2RC85 870 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 ZNF213O14771 459 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 ST18O60284 1047 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 EIF3JO75822 258 aaKnown RBP8.99□□□□□ -0.97
ABCD4-220ENST00000553998 RB1P06400 928 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 LINC00271P0C7V0 271 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 RSPH10BP0C881 870 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 PTH1RQ03431 593 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 HIC1Q14526 733 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 KIAA0753Q2KHM9 967 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 FAM117BQ6P1L5 589 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 FBXO11Q86XK2 927 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 PRSS33Q8NF86 280 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 SYTL5Q8TDW5 730 aaPredicted RBP8.99□□□□□ -0.97
ABCD4-220ENST00000553998 TBC1D5Q92609 795 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 ANKS1AQ92625 1134 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 EDAQ92838 391 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 TAAR1Q96RJ0 339 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 PRRX2Q99811 253 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 LMAN2LQ9H0V9 348 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 COL4A4P53420 1690 aaPredicted RBP8.99□□□□□ -0.97
ABCD4-220ENST00000553998 TANC1Q9C0D5 1861 aa8.99□□□□□ -0.97
ABCD4-220ENST00000553998 CFAP54Q96N23 3096 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 MBTPS2O43462 519 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 CAND2O75155 1236 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 PTPN5P54829 565 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 CHMP4BP1P59074 171 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 ZNF200P98182 395 aaPredicted RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 GHRHRQ02643 423 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms