RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 PQBP1O60828 265 aaKnown RBP6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 HOXC6P09630 235 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SKIP12755 728 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 IL9P15248 144 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CNGA1P29973 690 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MAPK4P31152 587 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RABGGTBP53611 331 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 FAAP100Q0VG06 881 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 NCOA4Q13772 614 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RASGRF1Q13972 1273 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CCDC102BQ68D86 513 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MFSD5Q6N075 450 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 GPR142Q7Z601 462 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SLC44A5Q8NCS7 719 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SSH1Q8WYL5 1049 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 IDI2Q9BXS1 227 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 GSX2Q9BZM3 304 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PORCNQ9H237 461 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PCMTD2Q9NV79 361 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TBX21Q9UL17 535 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 KIAA1024Q9UPX6 916 aa6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PA2G4Q9UQ80 394 aaKnown RBP6.85□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PTPRCP08575 1304 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ZNF521Q96K83 1311 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SALL1Q9NSC2 1324 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PLXNA1Q9UIW2 1896 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ANP32CO43423 234 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RGS9O75916 674 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MED26O95402 600 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TIMP1P01033 207 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 UBTFL1P0CB47 393 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ACRP10323 421 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CYBAP13498 195 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CSF2RAP15509 400 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 SSTR4P31391 388 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CYP2C19P33261 490 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 TIMM10P62072 90 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 IRX3P78415 501 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 PPIGQ13427 754 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 LRRC41Q15345 812 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 MFSD14CQ5VZR4 134 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ANO1Q5XXA6 986 aa6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 CCAR1Q8IX12 1150 aaKnown RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 ZGPATQ8N5A5 531 aaKnown RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 RALYQ9UKM9 306 aaKnown RBP6.84□□□□□ -1.31
SMARCE1P3-201ENST00000553649 COL4A6Q14031 1691 aa6.84□□□□□ -1.32
SMARCE1P3-201ENST00000553649 DOCK1Q14185 1865 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 MROH7-TTC4A0A0A0MT08 1334 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ARID1BQ8NFD5 2236 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PRR23AA6NEV1 266 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PAX4O43316 350 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 DEAF1O75398 565 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 CIAO1O76071 339 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 GRNP28799 593 aaKnown RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 IL15P40933 162 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 CD97P48960 835 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PSMA6P60900 246 aaKnown RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 MECOMQ03112 1051 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 RRP1BQ14684 758 aaKnown RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 LEXMQ3ZCV2 418 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 SPTY2D1Q68D10 685 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PSRC1Q6PGN9 363 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PI16Q6UXB8 463 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ANKRD33Q7Z3H0 272 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 BMP8AQ7Z5Y6 402 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 BTLAQ7Z6A9 289 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PLEKHH3Q7Z736 793 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 GPRC5AQ8NFJ5 357 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 NEUROD6Q96NK8 337 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 UCN2Q96RP3 112 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PRRX2Q99811 253 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 LPIN3Q9BQK8 851 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 UBE2ZQ9H832 354 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 CERS4Q9HA82 394 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 CWC22Q9HCG8 908 aaKnown RBP6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 SMC4Q9NTJ3 1288 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 RAI14Q9P0K7 980 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 RBPJLQ9UBG7 517 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 MYH13Q9UKX3 1938 aa6.83□□□□□ -1.32
SMARCE1P3-201ENST00000553649 MYH2Q9UKX2 1941 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 GPR75-ASB3A0A0A6YYF3 556 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 LPXNO60711 386 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 FSTP19883 344 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 TXKP42681 527 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 RHBDL3P58872 404 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 HERVK_113P62684 666 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ERVK-24P63145 666 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 TFCP2Q12800 502 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ACAP1Q15027 740 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 GORABQ5T7V8 394 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 WDR78Q5VTH9 848 aa6.82□□□□□ -1.32
SMARCE1P3-201ENST00000553649 CCDC174Q6PII3 467 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms