RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 LAMB3Q13751 1172 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SYCP1Q15431 976 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 HSP90B2PQ58FF3 399 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 ACBD5Q5T8D3 534 aaPredicted RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 TADA2BQ86TJ2 420 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 ERC1Q8IUD2 1116 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 DRAXINQ8NBI3 349 aaPredicted RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 GOLM1Q8NBJ4 401 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 B4GALNT2Q8NHY0 566 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 UCMAQ8WVF2 138 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 USP7Q93009 1102 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 TACO1Q9BSH4 297 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 ISCA1Q9BUE6 129 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 ZNF358Q9NW07 568 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SMAD7O15105 426 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 HMMRO75330 724 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 VIL1P09327 827 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 IMPDH2P12268 514 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 TATP17735 454 aaPredicted RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 ACTN2P35609 894 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 PRPHP41219 470 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 LIG3P49916 1009 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SCNN1DP51172 638 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 RACK1P63244 317 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 IFT88Q13099 833 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 WDR44Q5JSH3 913 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 USPL1Q5W0Q7 1092 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 IQCEQ6IPM2 695 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 FBXO38Q6PIJ6 1188 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 CPLX2Q6PUV4 134 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 DTHD1Q6ZMT9 781 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 TMC6Q7Z403 805 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 IQCF2Q8IXL9 164 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 LRRC59Q96AG4 307 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 SAAL1Q96ER3 474 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 MEIS3Q99687 375 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 TINF2Q9BSI4 451 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SRRTQ9BXP5 876 aaKnown RBP4.5□□□□□ -1.69
RDH11-204ENST00000553578 USP26Q9BXU7 913 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 PHACTR1Q9C0D0 580 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 CENPHQ9H3R5 247 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 LMCD1Q9NZU5 365 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 KLHL3Q9UH77 587 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 MED23Q9ULK4 1368 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SPATA31A1Q5TZJ5 1347 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SPATA31A5Q5VU36 1347 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 SPATA31A7Q8IWB4 1347 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 ZNF609O15014 1411 aa4.5□□□□□ -1.69
RDH11-204ENST00000553578 BTBD11A6QL63 1104 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 ERVV-1B6SEH8 477 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PPFIA3O75145 1194 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 KRT37O76014 449 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 IGKV5-2P06315 115 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 CSF1RP07333 972 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 SNRPA1P09661 255 aaKnown RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 PECAM1P16284 738 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 IRS1P35568 1242 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 POU5F1Q01860 360 aaKnown RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 TPD52L1Q16890 204 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 CFAP58Q5T655 872 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PGM2L1Q6PCE3 622 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 SYNE3Q6ZMZ3 975 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 MICALCLQ6ZW33 695 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 DDX42Q86XP3 938 aaKnown RBP eCLIP4.49□□□□□ -1.69
RDH11-204ENST00000553578 MCF2L2Q86YR7 1114 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 ITPRIPQ8IWB1 547 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PLBD2Q8NHP8 589 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 GPAMQ9HCL2 828 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 MAPK8IP1Q9UQF2 711 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PSME4Q14997 1843 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 GOLGA6L10A6NI86 522 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 ATF4P18848 351 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 OAS2P29728 719 aaKnown RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 TRPC1P48995 793 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 RASSF7Q02833 373 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 CRYMQ14894 314 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 CCDC65Q8IXS2 484 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 ELOA2Q8IYF1 753 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 TEKT1Q969V4 418 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 FAM81BQ96LP2 452 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PLEKHG4BQ96PX9 1271 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 MAGED1Q9Y5V3 778 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 NID2Q14112 1375 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 SPATA31A6Q5VVP1 1343 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 A0A1B0GTH6 734 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 TMEM229AB2RXF0 380 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 SPATA31C2B4DYI2 1134 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PHACTR2O75167 634 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 CAVIN2O95810 425 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PDE1AP54750 535 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PSMC1P62191 440 aaKnown RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 RBM6P78332 1123 aaKnown RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 CUL4AQ13619 759 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 PLS1Q14651 629 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 TIGD6Q17RP2 521 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 KRT24Q2M2I5 525 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 LRRC23Q53EV4 343 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 EFHC2Q5JST6 749 aa4.49□□□□□ -1.69
RDH11-204ENST00000553578 ZNF530Q6P9A1 599 aaPredicted RBP4.49□□□□□ -1.69
RDH11-204ENST00000553578 OLFML1Q6UWY5 402 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms