RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 MARCH10Q8NA82 808 aaPredicted RBP5.46□□□□□ -1.54
PCNX4-206ENST00000553513 SH3TC2Q8TF17 1288 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 KCNC2Q96PR1 638 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 DNAJC7Q99615 494 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 ARHGEF4Q9NR80 690 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 GPR27Q9NS67 375 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 CLDND1Q9NY35 253 aa5.46□□□□□ -1.54
PCNX4-206ENST00000553513 TRAV20A0A0B4J274 112 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 FAM221BA6H8Z2 402 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 SGSM2O43147 1006 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 PRODHO43272 600 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 SASH1O94885 1247 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
PCNX4-206ENST00000553513 CYP2C8P10632 490 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 HTRA3P83110 453 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 RASGRF1Q13972 1273 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 PTPROQ16827 1216 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 VMACQ2NL98 169 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 RSPO2Q6UXX9 243 aaPredicted RBP5.45□□□□□ -1.54
PCNX4-206ENST00000553513 ETV3LQ6ZN32 361 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 USP53Q70EK8 1073 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 MILR1Q7Z6M3 343 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 FILIP1Q7Z7B0 1213 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 SMARCC2Q8TAQ2 1214 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 FNIP1Q8TF40 1166 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 PCDH18Q9HCL0 1135 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 FBXL7Q9UJT9 491 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 PALD1Q9ULE6 856 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 PRKAB1Q9Y478 270 aa5.45□□□□□ -1.54
PCNX4-206ENST00000553513 FFAR3O14843 346 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 DGKIO75912 1065 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 PABPC1P11940 636 aaKnown RBP5.44□□□□□ -1.54
PCNX4-206ENST00000553513 NSMFQ6X4W1 530 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 ZC3H18Q86VM9 953 aaKnown RBP5.44□□□□□ -1.54
PCNX4-206ENST00000553513 MIB1Q86YT6 1006 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 DDX11Q96FC9 970 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 RNPC3Q96LT9 517 aaKnown RBP5.44□□□□□ -1.54
PCNX4-206ENST00000553513 PHF20Q9BVI0 1012 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 SPATA9Q9BWV2 254 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 EPB41L1Q9H4G0 881 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 SPC25Q9HBM1 224 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 LUC7LQ9NQ29 371 aaKnown RBP5.44□□□□□ -1.54
PCNX4-206ENST00000553513 ZNF652Q9Y2D9 606 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 KDM2BQ8NHM5 1336 aa5.44□□□□□ -1.54
PCNX4-206ENST00000553513 HGSO14964 777 aaPredicted RBP5.43□□□□□ -1.54
PCNX4-206ENST00000553513 DNAJC6O75061 913 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 HOXA5P20719 270 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 SSRP1Q08945 709 aaKnown RBP5.43□□□□□ -1.54
PCNX4-206ENST00000553513 VWA3BQ502W6 1294 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 STEAP3Q658P3 488 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 LILRA6Q6PI73 481 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 SAPCD2Q86UD0 394 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 FAM126BQ8IXS8 530 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 OSBP2Q969R2 916 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 IPO9Q96P70 1041 aaKnown RBP5.43□□□□□ -1.54
PCNX4-206ENST00000553513 ZFYVE21Q9BQ24 234 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 YIPF4Q9BSR8 244 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 NGRNQ9NPE2 291 aaKnown RBP5.43□□□□□ -1.54
PCNX4-206ENST00000553513 PFDN2Q9UHV9 154 aa5.43□□□□□ -1.54
PCNX4-206ENST00000553513 ADAMTS20P59510 1910 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 SH3D21A4FU49 640 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 MAFKO60675 156 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 C8BP07358 591 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 EMC4Q5J8M3 183 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 SPATC1Q76KD6 591 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 TP53I13Q8NBR0 393 aaPredicted RBP5.42□□□□□ -1.54
PCNX4-206ENST00000553513 THAP3Q8WTV1 239 aaPredicted RBP5.42□□□□□ -1.54
PCNX4-206ENST00000553513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.42□□□□□ -1.54
PCNX4-206ENST00000553513 PCDHB4Q9Y5E5 795 aa5.42□□□□□ -1.54
PCNX4-206ENST00000553513 ESYT3A0FGR9 886 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 KRIT1O00522 736 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 MSCO60682 206 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 KCNC1P48547 511 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 SLURP1P55000 103 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 CTSWP56202 376 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 TCEA2Q15560 299 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 NTRK3Q16288 839 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 KIZQ2M2Z5 673 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 PLEKHG4Q58EX7 1191 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 YOD1Q5VVQ6 348 aaPredicted RBP5.41□□□□□ -1.54
PCNX4-206ENST00000553513 STYK1Q6J9G0 422 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 CYP4F22Q6NT55 531 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 CD300LDQ6UXZ3 194 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 LIPIQ6XZB0 460 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 C16orf86Q6ZW13 317 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 IFNL3Q8IZI9 196 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 LINC00482Q8N8I6 264 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.41□□□□□ -1.54
PCNX4-206ENST00000553513 PHOSPHO1Q8TCT1 267 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 ZBTB8AQ96BR9 441 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 NOX5Q96PH1 765 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 NTMQ9P121 344 aa5.41□□□□□ -1.54
PCNX4-206ENST00000553513 NOP58Q9Y2X3 529 aaKnown RBP5.41□□□□□ -1.54
PCNX4-206ENST00000553513 TADA3O75528 432 aa5.4□□□□□ -1.54
PCNX4-206ENST00000553513 GRK2P25098 689 aa5.4□□□□□ -1.54
PCNX4-206ENST00000553513 GRK3P35626 688 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms