RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 OSBPL2Q9H1P3 480 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 PIF1Q9H611 641 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-220ENST00000553491 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 LAS1LQ9Y4W2 734 aaKnown RBP6.1□□□□□ -1.43
ATXN3-220ENST00000553491 RGPD3A6NKT7 1758 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-220ENST00000553491 RGPD4Q7Z3J3 1758 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 MYH14Q7Z406 1995 aaKnown RBP6.09□□□□□ -1.43
ATXN3-220ENST00000553491 PARD3Q8TEW0 1356 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 BIN1O00499 593 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 ACRP10323 421 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 TXKP42681 527 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 CASP7P55210 303 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 SLC15A2Q16348 729 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 ARSHQ5FYA8 562 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 MCM10Q7L590 875 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 TSPYL5Q86VY4 417 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-220ENST00000553491 TTC5Q8N0Z6 440 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 CELF2-AS1Q8N7Q2 184 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 TM9SF2Q99805 663 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
ATXN3-220ENST00000553491 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
ATXN3-220ENST00000553491 PALLDQ8WX93 1383 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 SHISA3A0PJX4 238 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 TPP2P29144 1249 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 GDNFP39905 211 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 RIPK4P57078 832 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 PPP2R5EQ16537 467 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 OGFOD2Q6N063 350 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 SMIM5Q71RC9 77 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 TTC6Q86TZ1 520 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 FAM9BQ8IZU0 186 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 TAB3Q8N5C8 712 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 SLC9A7Q96T83 725 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 PDGFDQ9GZP0 370 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 ACTR10Q9NZ32 417 aa6.08□□□□□ -1.44
ATXN3-220ENST00000553491 R3HCC1Q9Y3T6 440 aaKnown RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 SIPA1L3O60292 1781 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 COL3A1P02461 1466 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-220ENST00000553491 UBR3Q6ZT12 1888 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 HMGB2P26583 209 aaKnown RBP6.07□□□□□ -1.44
ATXN3-220ENST00000553491 POLR2BP30876 1174 aaKnown RBP6.07□□□□□ -1.44
ATXN3-220ENST00000553491 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
ATXN3-220ENST00000553491 ZYXQ15942 572 aaKnown RBP6.07□□□□□ -1.44
ATXN3-220ENST00000553491 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 RALGPS1Q5JS13 557 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 INTS3Q68E01 1043 aaKnown RBP6.07□□□□□ -1.44
ATXN3-220ENST00000553491 GIMAP6Q6P9H5 292 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 POU5F2Q8N7G0 328 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 MICAL1Q8TDZ2 1067 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 FAM168AQ92567 244 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 SPON1Q9HCB6 807 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 ST7Q9NRC1 585 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 SIRPGQ9P1W8 387 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 KCNH3Q9ULD8 1083 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 BCL9O00512 1426 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 NCAPD2Q15021 1401 aa6.07□□□□□ -1.44
ATXN3-220ENST00000553491 KDRP35968 1356 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 C4BP0C0L5 1744 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 TNFRSF10CO14798 259 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 GBP1P32455 592 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 TAF7Q15545 349 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 ZNF827Q17R98 1081 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 NBPF12Q5TAG4 269 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 LARP1BQ659C4 914 aaKnown RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 UNC5AQ6ZN44 842 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 NOP9Q86U38 636 aaKnown RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 MKL1Q969V6 931 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 TRIT1Q9H3H1 467 aaKnown RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 SP110Q9HB58 689 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 ZNF281Q9Y2X9 895 aa6.06□□□□□ -1.44
ATXN3-220ENST00000553491 KDM6AO15550 1401 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-220ENST00000553491 QSER1Q2KHR3 1735 aa6.05□□□□□ -1.44
ATXN3-220ENST00000553491 LTBP3Q9NS15 1303 aa6.05□□□□□ -1.44
ATXN3-220ENST00000553491 FAM86C2PA6NEL3 165 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms