RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 SAMD11Q96NU1 681 aa9.37□□□□□ -0.91
PCNX1-203ENST00000553272 CRBNQ96SW2 442 aa9.37□□□□□ -0.91
PCNX1-203ENST00000553272 TMEM47Q9BQJ4 181 aa9.37□□□□□ -0.91
PCNX1-203ENST00000553272 FAM50BQ9Y247 325 aa9.37□□□□□ -0.91
PCNX1-203ENST00000553272 CSPG5O95196 566 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 F2P00734 622 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 AMHP03971 560 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 PDHBP11177 359 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 TOP1P11387 765 aaKnown RBP9.36□□□□□ -0.91
PCNX1-203ENST00000553272 PSEN2P49810 448 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 GPM6BQ13491 265 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 KIAA0753Q2KHM9 967 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 HERC4Q5GLZ8 1057 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-203ENST00000553272 SEPT14Q6ZU15 432 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 CHST3Q7LGC8 479 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 MYOCDQ8IZQ8 938 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 TBC1D5Q92609 795 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 TOP1MTQ969P6 601 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-203ENST00000553272 GPATCH3Q96I76 525 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 TAAR1Q96RJ0 339 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 UPF3BQ9BZI7 483 aaKnown RBP9.36□□□□□ -0.91
PCNX1-203ENST00000553272 MAF1Q9H063 256 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 TCP11L1Q9NUJ3 509 aa9.36□□□□□ -0.91
PCNX1-203ENST00000553272 DDX41Q9UJV9 622 aaKnown RBP9.36□□□□□ -0.91
PCNX1-203ENST00000553272 EMSYQ7Z589 1322 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 SNHG28P0DPA3 235 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 HOXD8P13378 290 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-203ENST00000553272 FOXK2Q01167 660 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 ZNF543Q08ER8 600 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 MFSD10Q14728 455 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
PCNX1-203ENST00000553272 PLEKHG4Q58EX7 1191 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 PPTC7Q8NI37 304 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 SYTL5Q8TDW5 730 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-203ENST00000553272 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 KATNAL1Q9BW62 490 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 CHMP4BQ9H444 224 aaKnown RBP9.35□□□□□ -0.91
PCNX1-203ENST00000553272 NSUN3Q9H649 340 aaKnown RBP9.35□□□□□ -0.91
PCNX1-203ENST00000553272 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 COL20A1Q9P218 1284 aa9.35□□□□□ -0.91
PCNX1-203ENST00000553272 RSPH10B2B2RC85 870 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 NCK2O43639 380 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 PPFIA4O75335 1185 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 KRT37O76014 449 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 RSPH10BP0C881 870 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 ZNF286BP0CG31 522 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 KCNA4P22459 653 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 VCPP55072 806 aaKnown RBP9.34□□□□□ -0.91
PCNX1-203ENST00000553272 HNRNPUQ00839 825 aaKnown RBP eCLIP9.34□□□□□ -0.91
PCNX1-203ENST00000553272 DLX2Q07687 328 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-203ENST00000553272 LAMC2Q13753 1193 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 ALX1Q15699 326 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 STXBP2Q15833 593 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 USH1GQ495M9 461 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 VPS53Q5VIR6 699 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 SERINC5Q86VE9 423 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 FBXO11Q86XK2 927 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 PI4K2BQ8TCG2 481 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 NSUN6Q8TEA1 469 aaKnown RBP9.34□□□□□ -0.91
PCNX1-203ENST00000553272 EDAQ92838 391 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 TTC14Q96N46 770 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 OSBPL7Q9BZF2 842 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 CLDND1Q9NY35 253 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 MYO10Q9HD67 2058 aa9.34□□□□□ -0.91
PCNX1-203ENST00000553272 TTC41PQ6P2S7 1318 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 GVINP1Q7Z2Y8 2422 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 MYH6P13533 1939 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 DMXL1Q9Y485 3027 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 TPRP12270 2363 aaKnown RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 TMEM221A6NGB7 291 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 C5orf67F2Z3F1 127 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 M0R296 226 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 MBTPS2O43462 519 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 EIF3JO75822 258 aaKnown RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 HOXC8P31273 242 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 THPOP40225 353 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 SUGP1Q8IWZ8 645 aaKnown RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 DHX37Q8IY37 1157 aaKnown RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 ATOH1Q92858 354 aaPredicted RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 YME1L1Q96TA2 773 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 RMDN3Q96TC7 470 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 POP1Q99575 1024 aaKnown RBP9.33□□□□□ -0.92
PCNX1-203ENST00000553272 FSD1Q9BTV5 496 aa9.33□□□□□ -0.92
PCNX1-203ENST00000553272 PLXNA4Q9HCM2 1894 aa9.32□□□□□ -0.92
PCNX1-203ENST00000553272 H0Y858 1186 aa9.32□□□□□ -0.92
PCNX1-203ENST00000553272 UPP2O95045 317 aa9.32□□□□□ -0.92
PCNX1-203ENST00000553272 FGAP02671 866 aa9.32□□□□□ -0.92
PCNX1-203ENST00000553272 RB1P06400 928 aa9.32□□□□□ -0.92
PCNX1-203ENST00000553272 NR3C2P08235 984 aa9.32□□□□□ -0.92
PCNX1-203ENST00000553272 GOLGA8HP0CJ92 632 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms