RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ICAM3P32942 547 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 MCM2P49736 904 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 ACLYP53396 1101 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 NLRP5P59047 1200 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 SNX17Q15036 470 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 NPY5RQ15761 445 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 KCNA10Q16322 511 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 BRDTQ58F21 947 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 GNASQ5JWF2 1037 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 DDX41Q9UJV9 622 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 JAK2O60674 1132 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 CABYRO75952 493 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 ASGR1P07306 291 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 FDPSP14324 419 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 ARHGAP4P98171 946 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 BEX3Q00994 111 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 C1orf53Q5VUE5 145 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 JAKMIP3Q5VZ66 844 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 CRYGNQ8WXF5 182 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 COPS5Q92905 334 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 SENP6Q9GZR1 1112 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 UBIAD1Q9Y5Z9 338 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 ELP1O95163 1332 aa13.38□□□□□ -0.27
TRAFD1-209ENST00000552896 A6NJR5 290 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 SPATA31C2B4DYI2 1134 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 M0R2N6 131 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 ADAMTS3O15072 1205 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 CYP3A4P08684 503 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 ITGB5P18084 799 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.274e-6■■■■□ 26.3
TRAFD1-209ENST00000552896 HMGN5P82970 282 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 MTMR1Q13613 665 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 LRRC26Q2I0M4 334 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 BLIDQ8IZY5 108 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 PPTC7Q8NI37 304 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 RASGRP4Q8TDF6 673 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 TRIP12Q14669 1992 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-209ENST00000552896 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 EVI5O60447 810 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 KPNA6O60684 536 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 GGPS1O95749 300 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 MMP3P08254 477 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 PURAQ00577 322 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 NEDD9Q14511 834 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 METTL7BQ6UX53 244 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 DHX37Q8IY37 1157 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 JADE2Q9NQC1 790 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 RTEL1Q9NZ71 1219 aa13.36□□□□□ -0.27
TRAFD1-209ENST00000552896 MAFGO15525 162 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 KCNA2P16389 499 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 RTP1P59025 263 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 SP2Q02086 613 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 CXCL17Q6UXB2 119 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 DPF3Q92784 378 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 MXRA8Q9BRK3 442 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 BRMS1Q9HCU9 246 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 KCNJ14Q9UNX9 436 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 MROH7Q68CQ1 1323 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 MYH15Q9Y2K3 1946 aa13.35□□□□□ -0.27
TRAFD1-209ENST00000552896 IGLV3-22A0A075B6J6 115 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 MEIS1O00470 390 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 DTNBO60941 627 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 MMP1P03956 469 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 CIITAP33076 1130 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 TRIM29Q14134 588 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 NONOQ15233 471 aaKnown RBP eCLIP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms