RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 ATP2B3Q16720 1220 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 PCNX4Q63HM2 1172 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 ZNF804AQ7Z570 1209 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 FBXO33Q7Z6M2 555 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 NBPF11Q86T75 865 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 SSH3Q8TE77 659 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 UBE2Q2Q8WVN8 375 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 FAM84BQ96KN1 310 aaPredicted RBP6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 CRBNQ96SW2 442 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 COA1Q9GZY4 146 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 CD209Q9NNX6 404 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 ZBTB40Q9NUA8 1239 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 CACNA2D2Q9NY47 1150 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 GPRC5DQ9NZD1 345 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 HDAC5Q9UQL6 1122 aa6.86□□□□□ -1.31
SMARCC2-213ENST00000552627 ZNF609O15014 1411 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 ASTN2O75129 1339 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 IQCA1LA6NCM1 817 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 SURF6O75683 361 aaKnown RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 TOMM70O94826 608 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 SASH1O94885 1247 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 MED26O95402 600 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 FGFR2P21802 821 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 HIBADHP31937 336 aaKnown RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 C1QTNF8P60827 252 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 ERVK-24P63145 666 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 IRX6P78412 446 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 DAB2P98082 770 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 CHAF1AQ13111 956 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 UBE4AQ14139 1066 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 TTLL4Q14679 1199 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 CCDC85BQ15834 202 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 CPSF6Q16630 551 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 TBC1D10BQ4KMP7 808 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 DACT2Q5SW24 774 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 RASIP1Q5U651 963 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 SCARA3Q6AZY7 606 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 SEZ6L2Q6UXD5 910 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 C15orf52Q6ZUT6 534 aaKnown RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 SMYD4Q8IYR2 804 aaPredicted RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 CERS5Q8N5B7 392 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 C1GALT1Q9NS00 363 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 CNOT7Q9UIV1 285 aaKnown RBP6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 EXOC6BQ9Y2D4 811 aa6.85□□□□□ -1.31
SMARCC2-213ENST00000552627 FAM170BA6NMN3 283 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 F8W031 263 aaPredicted RBP6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 DYNC1LI2O43237 492 aaPredicted RBP6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 SLC5A1P13866 664 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 IL1R1P14778 569 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 DEKP35659 375 aaKnown RBP6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 PHKA1P46020 1223 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 TIMM10P62072 90 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 HTRA3P83110 453 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 CYP27A1Q02318 531 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 G3BP1Q13283 466 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 TTLL5Q6EMB2 1281 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 DLK2Q6UY11 383 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 VPS37DQ86XT2 251 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 KIAA0825Q8IV33 1275 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 LPIN2Q92539 896 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 GATA6Q92908 595 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 SSU72Q9NP77 194 aaKnown RBP6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 PCOLCE2Q9UKZ9 415 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 SCAF8Q9UPN6 1271 aaKnown RBP6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 PCDHAC2Q9Y5I4 1007 aa6.84□□□□□ -1.31
SMARCC2-213ENST00000552627 AOX1Q06278 1338 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 A0A1B0GUL7 405 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 TRAF5O00463 557 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 IFIT1P09914 478 aaKnown RBP6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 CAVIN4Q5BKX8 364 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 STRIP1Q5VSL9 837 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 LDHDQ86WU2 507 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 HOMEZQ8IX15 550 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 RNF214Q8ND24 703 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 SMC1BQ8NDV3 1235 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 TDRD7Q8NHU6 1098 aaKnown RBP6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 FAM161BQ96MY7 647 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 NEUROD6Q96NK8 337 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 GMLQ99445 158 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 ADARB2Q9NS39 739 aaKnown RBP6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 CSADQ9Y600 493 aa6.83□□□□□ -1.32
SMARCC2-213ENST00000552627 POLR2AP24928 1970 aaKnown RBP6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 ADM5C9JUS6 153 aa6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 H7C1D1 291 aa6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 FRAT2O75474 233 aaPredicted RBP6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 FOSL1P15407 271 aa6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 RPS12P25398 132 aaKnown RBP6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 ZNF280AP59817 542 aaPredicted RBP6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
SMARCC2-213ENST00000552627 TNNI3KQ59H18 835 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms