RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 SPC25Q9HBM1 224 aa12.44□□□□□ -0.42
CNOT2-239ENST00000552483 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
CNOT2-239ENST00000552483 SH3GLB2Q9NR46 395 aa12.44□□□□□ -0.42
CNOT2-239ENST00000552483 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
CNOT2-239ENST00000552483 A6NJR5 290 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 SPATA31C2B4DYI2 1134 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 H0YGN5 161 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 M0R2N6 131 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 ATP9AO75110 1047 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 CDKL5O76039 1030 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 GGPS1O95749 300 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 MMP3P08254 477 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 MYL3P08590 195 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 SREBF1P36956 1147 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 NLRP5P59047 1200 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 REXO1Q8N1G1 1221 aaKnown RBP12.43□□□□□ -0.42
CNOT2-239ENST00000552483 PCSK9Q8NBP7 692 aaKnown RBP12.43□□□□□ -0.42
CNOT2-239ENST00000552483 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
CNOT2-239ENST00000552483 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
CNOT2-239ENST00000552483 STARD7Q9NQZ5 370 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 PKD2L1Q9P0L9 805 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
CNOT2-239ENST00000552483 ATP11BQ9Y2G3 1177 aa12.43□□□□□ -0.42
CNOT2-239ENST00000552483 EVI5O60447 810 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 FOSP01100 380 aaPredicted RBP12.42□□□□□ -0.42
CNOT2-239ENST00000552483 ARP10275 920 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 SYN1P17600 705 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 ARHGAP4P98171 946 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
CNOT2-239ENST00000552483 HSDL1Q3SXM5 330 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 CELF3Q5SZQ8 465 aaKnown RBP12.42□□□□□ -0.42
CNOT2-239ENST00000552483 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 DAGLBQ8NCG7 672 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 PHF20Q9BVI0 1012 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 PCDHA4Q9UN74 947 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 WDR81Q562E7 1941 aa12.42□□□□□ -0.42
CNOT2-239ENST00000552483 MKI67P46013 3256 aaKnown RBP12.41□□□□□ -0.42
CNOT2-239ENST00000552483 FAM205CA6NFA0 338 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 FAM86B1E9PN63 330 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 FIBPO43427 364 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 STAM2O75886 525 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 FAM86B2P0C5J1 330 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 KCNA2P16389 499 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 GNA11P29992 359 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 CDK7P50613 346 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 TLE2Q04725 743 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 EARS2Q5JPH6 523 aaKnown RBP12.41□□□□□ -0.42
CNOT2-239ENST00000552483 C1orf53Q5VUE5 145 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 NLRX1Q86UT6 975 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 TEX2Q8IWB9 1127 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
CNOT2-239ENST00000552483 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 KAT2BQ92831 832 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-239ENST00000552483 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-239ENST00000552483 GLT1D1Q96MS3 346 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 MXRA8Q9BRK3 442 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 GLT8D2Q9H1C3 349 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
CNOT2-239ENST00000552483 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-239ENST00000552483 ELP1O95163 1332 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 A0A0U1RQG5 324 aaPredicted RBP12.4□□□□□ -0.42
CNOT2-239ENST00000552483 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 CYP3A4P08684 503 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 ZNF286BP0CG31 522 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.42
CNOT2-239ENST00000552483 CPT1AP50416 773 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 GNPTABQ3T906 1256 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 CYFIP1Q7L576 1253 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 SLC43A3Q8NBI5 491 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 SPATA33Q96N06 139 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 EHMT1Q9H9B1 1298 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 PDLIM7Q9NR12 457 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 SH2B1Q9NRF2 756 aaPredicted RBP12.4□□□□□ -0.42
CNOT2-239ENST00000552483 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
CNOT2-239ENST00000552483 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 ARVCFO00192 962 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 MEIS1O00470 390 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 ST18O60284 1047 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 ZEB2O60315 1214 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 PQBP1O60828 265 aaKnown RBP12.39□□□□□ -0.43
CNOT2-239ENST00000552483 TGFB3P10600 412 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 ITGB8P26012 769 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 SP4Q02446 784 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 ITGB3BPQ13352 177 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-239ENST00000552483 MTMR1Q13613 665 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 ITGA7Q13683 1181 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 LAMC2Q13753 1193 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 CEP55Q53EZ4 464 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 PRPF38BQ5VTL8 546 aaKnown RBP12.39□□□□□ -0.43
CNOT2-239ENST00000552483 KRT40Q6A162 431 aa12.39□□□□□ -0.43
CNOT2-239ENST00000552483 FAM126BQ8IXS8 530 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms