RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ZMYND8Q9ULU4 1186 aaPredicted RBP21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 LIMCH1Q9UPQ0 1083 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 MROH7Q68CQ1 1323 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 PQBP1O60828 265 aaKnown RBP21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 LARGE1O95461 756 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 GGPS1O95749 300 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 UBA1P22314 1058 aaKnown RBP21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 WASF1Q92558 559 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 GPRASP2Q96D09 838 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 KIF2CQ99661 725 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 MLXIPQ9HAP2 919 aa21.12■□□□□ 0.97
PRPF40B-216ENST00000552301 A6NJR5 290 aa21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 ST18O60284 1047 aa21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 ICAM3P32942 547 aa21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 ZNF76P36508 570 aa21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 CLK2P49760 499 aaKnown RBP21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 NEDD9Q14511 834 aa21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 FAM177A1Q8N128 213 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 EMID1Q96A84 441 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 MTG1Q9BT17 334 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 PRDM5Q9NQX1 630 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 ORC3Q9UBD5 711 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-216ENST00000552301 DCDC2CA8MYV0 355 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 SPATA31C2B4DYI2 1134 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 SORBS3O60504 671 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 MMP3P08254 477 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 SREBF1P36956 1147 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 PURAQ00577 322 aaKnown RBP21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 TLE2Q04725 743 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 CELF3Q5SZQ8 465 aaKnown RBP21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 ZSCAN31Q96LW9 406 aaPredicted RBP21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 SPATA33Q96N06 139 aa21.1■□□□□ 0.97
PRPF40B-216ENST00000552301 ARVCFO00192 962 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 NOP56O00567 594 aaKnown RBP21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 SYN1P17600 705 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 ARHGAP4P98171 946 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 MTMR1Q13613 665 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 ITGA7Q13683 1181 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 DGKDQ16760 1214 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 GIMAP8Q8ND71 665 aaPredicted RBP21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 IL27Q8NEV9 243 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 PPTC7Q8NI37 304 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 TBC1D32Q96NH3 1257 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 SEZ6LQ9BYH1 1024 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 SH2B1Q9NRF2 756 aaPredicted RBP21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 PCDHA4Q9UN74 947 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 UBIAD1Q9Y5Z9 338 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 MYH7BA7E2Y1 1941 aa21.09■□□□□ 0.97
PRPF40B-216ENST00000552301 TLR3O15455 904 aaKnown RBP21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 CLTBP09497 229 aa21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 MYSM1Q5VVJ2 828 aa21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 GALNT17Q6IS24 598 aa21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 RASGRP4Q8TDF6 673 aa21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 SENP7Q9BQF6 1050 aa21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 JADE2Q9NQC1 790 aa21.08■□□□□ 0.97
PRPF40B-216ENST00000552301 MAFGO15525 162 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 CTDNEP1O95476 244 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 ITGB5P18084 799 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 CHMP4BP1P59074 171 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 PSMC6P62333 389 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 SP2Q02086 613 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 SEMA3FQ13275 785 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 CEP55Q53EZ4 464 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 METTL7BQ6UX53 244 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 ANKRD33Q7Z3H0 272 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 CCDC83Q8IWF9 413 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 NSUN7Q8NE18 718 aaKnown RBP21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 TOX2Q96NM4 488 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 LBHD1Q9BQE6 289 aaPredicted RBP21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 MXRA8Q9BRK3 442 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 ALG1Q9BT22 464 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 BACH2Q9BYV9 841 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 PKD2L1Q9P0L9 805 aa21.07■□□□□ 0.96
PRPF40B-216ENST00000552301 FAM47CQ5HY64 1035 aa21.06■□□□□ 0.96
PRPF40B-216ENST00000552301 CYFIP1Q7L576 1253 aa21.06■□□□□ 0.96
PRPF40B-216ENST00000552301 BLIDQ8IZY5 108 aa21.06■□□□□ 0.96
PRPF40B-216ENST00000552301 KATNAL1Q9BW62 490 aa21.06■□□□□ 0.96
PRPF40B-216ENST00000552301 PDLIM7Q9NR12 457 aa21.06■□□□□ 0.96
PRPF40B-216ENST00000552301 DTNBO60941 627 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 SP4Q02446 784 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 TRIM29Q14134 588 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 HSDL1Q3SXM5 330 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 DAGLBQ8NCG7 672 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 BRMS1Q9HCU9 246 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 TMEM39AQ9NV64 488 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 KCNJ14Q9UNX9 436 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 SCN10AQ9Y5Y9 1956 aa21.05■□□□□ 0.96
PRPF40B-216ENST00000552301 JAK2O60674 1132 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 ZNF286BP0CG31 522 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 CDK7P50613 346 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 CHRDL2Q6WN34 429 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 SDF4Q9BRK5 362 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 KCNH7Q9NS40 1196 aa21.04■□□□□ 0.96
PRPF40B-216ENST00000552301 ADAMTS3O15072 1205 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 PPFIA4O75335 1185 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 CYP3A4P08684 503 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 KCNA2P16389 499 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 SETQ01105 290 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms