RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 DDX11Q96FC9 970 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 NSUN3Q9H649 340 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 RALYQ9UKM9 306 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 MYH1P12882 1939 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 GSG1L2A8MUP6 293 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 POLR3DP05423 398 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 PUM1Q14671 1186 aaKnown RBP eCLIP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 SART3Q15020 963 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 RETREG2Q8NC44 543 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 ATP8A2Q9NTI2 1148 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
RBFOX1-214ENST00000552089 ANKRD11Q6UB99 2663 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 COL11A1P12107 1806 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 PTGS1P23219 599 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 LIFRP42702 1097 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 KRT85P78386 507 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 TNFAIP2Q03169 654 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 PKP1Q13835 747 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 FAM117BQ6P1L5 589 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 ARMCX2Q7L311 632 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 EHD4Q9H223 541 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 MTMR6Q9Y217 621 aa13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 MAP1BP46821 2468 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-214ENST00000552089 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 TANC1Q9C0D5 1861 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 USP17L21D6R901 530 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 MPHOSPH10O00566 681 aaKnown RBP13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 FOXP2O15409 715 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 PDGFBP01127 241 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 SHMT1P34896 483 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 DLX2Q07687 328 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 ACAP1Q15027 740 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 CTR9Q6PD62 1173 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 TTC6Q86TZ1 520 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 BRF1Q92994 677 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 DYNLL2Q96FJ2 89 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 KATNBL1Q9H079 304 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 NAPBQ9H115 298 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 ZNF214Q9UL59 606 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-214ENST00000552089 BAZ2AQ9UIF9 1905 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 NCK2O43639 380 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 APPP05067 770 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 MB21D2Q8IYB1 491 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 FGD4Q96M96 766 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-214ENST00000552089 EP300Q09472 2414 aaPredicted RBP13.77□□□□□ -0.2
RBFOX1-214ENST00000552089 LOC730098B7Z3J9 87 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 VWA5AO00534 786 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 DYNC1LI2O43237 492 aaPredicted RBP13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 CPA1P15085 419 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 PDIA3P30101 505 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 GABPAQ06546 454 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 GPM6BQ13491 265 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 CTC1Q2NKJ3 1217 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 EPC2Q52LR7 807 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 IFNL3Q8IZI9 196 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 STK11IPQ8N1F8 1099 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
RBFOX1-214ENST00000552089 H3BQV1 296 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 TBX10O75333 385 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 TDO2P48775 406 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 FAM47CQ5HY64 1035 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 MFSD6Q6ZSS7 791 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 KIAA2013Q8IYS2 634 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 STAG1Q8WVM7 1258 aa13.76□□□□□ -0.21
RBFOX1-214ENST00000552089 ERICH2A1L162 156 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 H3BNC9 293 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 PRC1O43663 620 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 BFSP2Q13515 415 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 WASF1Q92558 559 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 PARP14Q460N5 1801 aa13.75□□□□□ -0.21
RBFOX1-214ENST00000552089 CPLX1O14810 134 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms