RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 DDX41Q9UJV9 622 aaKnown RBP17.96■□□□□ 0.47
CACNB3-220ENST00000551716 TMEM221A6NGB7 291 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 M0R296 226 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 ORC4O43929 436 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
CACNB3-220ENST00000551716 RASGRP2Q7LDG7 609 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 SERINC5Q86VE9 423 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 MCF2L2Q86YR7 1114 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 ANKS1AQ92625 1134 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 ANAPC4Q9UJX5 808 aa17.95■□□□□ 0.46
CACNB3-220ENST00000551716 FRMPD2Q68DX3 1309 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-220ENST00000551716 LCTP09848 1927 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 C5orf67F2Z3F1 127 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-220ENST00000551716 GFRA3O60609 400 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 CAND2O75155 1236 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 UPP2O95045 317 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 IER5LQ5T953 404 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 FIBCD1Q8N539 461 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 IL17RAQ96F46 866 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 TTC14Q96N46 770 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
CACNB3-220ENST00000551716 FGRP09769 529 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 KCNV1Q6PIU1 500 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 FBXL6Q8N531 539 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 APBB2Q92870 758 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 WNT8BQ93098 351 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 PPP2R3CQ969Q6 453 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 RMDN3Q96TC7 470 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 IFIH1Q9BYX4 1025 aaKnown RBP17.93■□□□□ 0.46
CACNB3-220ENST00000551716 INCENPQ9NQS7 918 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 CD207Q9UJ71 328 aa17.93■□□□□ 0.46
CACNB3-220ENST00000551716 PDHBP11177 359 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-220ENST00000551716 BMPR1AP36894 532 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 ZNF200P98182 395 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-220ENST00000551716 ZNF543Q08ER8 600 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 HYAL1Q12794 435 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 ZMYM1Q5SVZ6 1142 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 SYTL5Q8TDW5 730 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-220ENST00000551716 TAAR1Q96RJ0 339 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 SEC62Q99442 399 aaKnown RBP17.92■□□□□ 0.46
CACNB3-220ENST00000551716 MRVI1Q9Y6F6 885 aa17.92■□□□□ 0.46
CACNB3-220ENST00000551716 ZNF286BP0CG31 522 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 CTNNB1P35222 781 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 ZXDAP98168 799 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 TCF15Q12870 199 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 CLUL1Q15846 466 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 USH1GQ495M9 461 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 GPATCH4Q5T3I0 446 aaKnown RBP17.91■□□□□ 0.46
CACNB3-220ENST00000551716 ARHGEF16Q5VV41 709 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 ATP6V0A1Q93050 837 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 ZFHX2Q9C0A1 2572 aaPredicted RBP17.91■□□□□ 0.46
CACNB3-220ENST00000551716 ABCB11O95342 1321 aa17.91■□□□□ 0.46
CACNB3-220ENST00000551716 ZDBF2Q9HCK1 2354 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 C17orf102A2RUQ5 167 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 EYA4O95677 639 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 NUBP1P53384 320 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 DLX2Q07687 328 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-220ENST00000551716 ADAM15Q13444 863 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 PLVAPQ9BX97 442 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 TECTAO75443 2155 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 COL4A6Q14031 1691 aa17.9■□□□□ 0.46
CACNB3-220ENST00000551716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-220ENST00000551716 SNHG28P0DPA3 235 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 GNAT1P11488 350 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 MYSM1Q5VVJ2 828 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 SPATA33Q96N06 139 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 FSD1Q9BTV5 496 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 IGFLR1Q9H665 355 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 TRIOO75962 3097 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 USP34Q70CQ2 3546 aa17.89■□□□□ 0.45
CACNB3-220ENST00000551716 LOC730098B7Z3J9 87 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 GRM6O15303 877 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 NR3C2P08235 984 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 TGFB3P10600 412 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 HSPD1P10809 573 aaKnown RBP17.88■□□□□ 0.45
CACNB3-220ENST00000551716 NDUFV1P49821 464 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 SIGLEC14Q08ET2 396 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 ALX1Q15699 326 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 ATOH1Q92858 354 aaPredicted RBP17.88■□□□□ 0.45
CACNB3-220ENST00000551716 CLP1Q92989 425 aaKnown RBP17.88■□□□□ 0.45
CACNB3-220ENST00000551716 MRPL11Q9Y3B7 192 aaKnown RBP17.88■□□□□ 0.45
CACNB3-220ENST00000551716 TTC41PQ6P2S7 1318 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 PTPRZ1P23471 2315 aaPredicted RBP17.88■□□□□ 0.45
CACNB3-220ENST00000551716 MICAL3Q7RTP6 2002 aa17.88■□□□□ 0.45
CACNB3-220ENST00000551716 TBX10O75333 385 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 MMP1P03956 469 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 HIC1Q14526 733 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 CBX2Q14781 532 aaPredicted RBP17.87■□□□□ 0.45
CACNB3-220ENST00000551716 NAALADL2Q58DX5 795 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 RRP12Q5JTH9 1297 aaKnown RBP17.87■□□□□ 0.45
CACNB3-220ENST00000551716 CELF3Q5SZQ8 465 aaKnown RBP17.87■□□□□ 0.45
CACNB3-220ENST00000551716 TSHZ3Q63HK5 1081 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 TBC1D5Q92609 795 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 CACNA1HO95180 2353 aa17.87■□□□□ 0.45
CACNB3-220ENST00000551716 H3BRB1 525 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms