RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTCH1-222ENST00000551425 WDR19Q8NEZ3 1342 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 MICAL3Q7RTP6 2002 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 PROB1E7EW31 1015 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 EYA4O95677 639 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 ZNF200P98182 395 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-222ENST00000551425 CBX2Q14781 532 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-222ENST00000551425 CHST3Q7LGC8 479 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 ERMP1Q7Z2K6 904 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 SERINC5Q86VE9 423 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 SEPT8Q92599 483 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 ATOH1Q92858 354 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-222ENST00000551425 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-222ENST00000551425 MAF1Q9H063 256 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
PTCH1-222ENST00000551425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-222ENST00000551425 GRM6O15303 877 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 UPP2O95045 317 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 LINC00271P0C7V0 271 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-222ENST00000551425 CTNNB1P35222 781 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 BMPR1AP36894 532 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 THPOP40225 353 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 SIGLEC14Q08ET2 396 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 ADAM15Q13444 863 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 HIC1Q14526 733 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 SEPT14Q6ZU15 432 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 FIBCD1Q8N539 461 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 PPTC7Q8NI37 304 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 IFIH1Q9BYX4 1025 aaKnown RBP14.05□□□□□ -0.16
PTCH1-222ENST00000551425 NAPBQ9H115 298 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 DDX41Q9UJV9 622 aaKnown RBP14.05□□□□□ -0.16
PTCH1-222ENST00000551425 RWDD3Q9Y3V2 267 aa14.05□□□□□ -0.16
PTCH1-222ENST00000551425 KMT2EQ8IZD2 1858 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 LINC01565O15544 149 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 ZNF286BP0CG31 522 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 AVPR2P30518 371 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 GTF2F1P35269 517 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTCH1-222ENST00000551425 NUBP1P53384 320 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 VCPP55072 806 aaKnown RBP14.04□□□□□ -0.16
PTCH1-222ENST00000551425 LAMC2Q13753 1193 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 DHX37Q8IY37 1157 aaKnown RBP14.04□□□□□ -0.16
PTCH1-222ENST00000551425 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 IL17RAQ96F46 866 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 ASIC4Q96FT7 647 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
PTCH1-222ENST00000551425 CAND2O75155 1236 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 MMP1P03956 469 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 STXBP2Q15833 593 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 SMRP1Q8NCR6 262 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 NSUN6Q8TEA1 469 aaKnown RBP14.03□□□□□ -0.16
PTCH1-222ENST00000551425 CLP1Q92989 425 aaKnown RBP14.03□□□□□ -0.16
PTCH1-222ENST00000551425 IWS1Q96ST2 819 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 IGFLR1Q9H665 355 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 FRMPD2Q68DX3 1309 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-222ENST00000551425 RALGAPA2Q2PPJ7 1873 aa14.03□□□□□ -0.16
PTCH1-222ENST00000551425 MYO7AQ13402 2215 aa14.02□□□□□ -0.16
PTCH1-222ENST00000551425 PPFIA4O75335 1185 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 TOP1P11387 765 aaKnown RBP14.02□□□□□ -0.17
PTCH1-222ENST00000551425 HOXC8P31273 242 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 NDUFV1P49821 464 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 COASYQ13057 564 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 ASCL5Q7RTU5 278 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 APBB2Q92870 758 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 FSD1Q9BTV5 496 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 LRRCC1Q9C099 1032 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 INCENPQ9NQS7 918 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 CLEC1BQ9P126 229 aa14.02□□□□□ -0.17
PTCH1-222ENST00000551425 PTPRZ1P23471 2315 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-222ENST00000551425 NLRC5Q86WI3 1866 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 H0Y858 1186 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 RANBP6O60518 1105 aaKnown RBP14.01□□□□□ -0.17
PTCH1-222ENST00000551425 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
PTCH1-222ENST00000551425 PDHBP11177 359 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 RRP1P56182 461 aaKnown RBP14.01□□□□□ -0.17
PTCH1-222ENST00000551425 CTDSPL2Q05D32 466 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 CAMK1Q14012 370 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-222ENST00000551425 PPP2R3CQ969Q6 453 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 PLVAPQ9BX97 442 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 RC3H2Q9HBD1 1191 aaKnown RBP14.01□□□□□ -0.17
PTCH1-222ENST00000551425 TLR9Q9NR96 1032 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 ZBTB40Q9NUA8 1239 aa14.01□□□□□ -0.17
PTCH1-222ENST00000551425 ATG2AQ2TAZ0 1938 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 ADGRA3Q8IWK6 1321 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 C17orf102A2RUQ5 167 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 PRR23AA6NEV1 266 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 ORC4O43929 436 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 FGRP09769 529 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 ICAM3P32942 547 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 ZNF543Q08ER8 600 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 EFHBQ8N7U6 833 aa14□□□□□ -0.17
PTCH1-222ENST00000551425 TBC1D5Q92609 795 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms