RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 FSIP1Q8NA03 581 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
NEK3-203ENST00000551355 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 HAS1Q92839 578 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 ZNF577Q9BSK1 485 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 CSRNP2Q9H175 543 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 KCNH7Q9NS40 1196 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 DDX19AQ9NUU7 478 aaKnown RBP11.74□□□□□ -0.53
NEK3-203ENST00000551355 SAGE1Q9NXZ1 904 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 SOWAHBA6NEL2 793 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
NEK3-203ENST00000551355 MSH4O15457 936 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 PGK2P07205 417 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 HOXC6P09630 235 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 HSPA6P17066 643 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 ICAM3P32942 547 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 TECP42680 631 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 IRF5Q13568 498 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 ARHGEF6Q15052 776 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 MORN1Q5T089 497 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 SHC4Q6S5L8 630 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 IL31RAQ8NI17 732 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 TIGD1Q96MW7 591 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 CCSER1Q9C0I3 900 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 HOOK1Q9UJC3 728 aaKnown RBP11.73□□□□□ -0.53
NEK3-203ENST00000551355 KCNH3Q9ULD8 1083 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 HPSEQ9Y251 543 aa11.73□□□□□ -0.53
NEK3-203ENST00000551355 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 SYNGAP1Q96PV0 1343 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 GAS7O60861 476 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 KINO60870 393 aaKnown RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 PSMD10O75832 226 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 LETM1O95202 739 aaPredicted RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 GNRH1P01148 92 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 PFKFB1P16118 471 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 RGS2P41220 211 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 SYKP43405 635 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 MAP2K1Q02750 393 aaPredicted RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 MAP2K5Q13163 448 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 IL17AQ16552 155 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 LRCH2Q5VUJ6 765 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 KRT79Q5XKE5 535 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 KANK3Q6NY19 840 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 SYMPKQ92797 1274 aaKnown RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 CALML4Q96GE6 196 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 PURBQ96QR8 312 aaKnown RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 SDF4Q9BRK5 362 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 TEKT3Q9BXF9 490 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 AGO4Q9HCK5 861 aaKnown RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 MRVI1Q9Y6F6 885 aa11.72□□□□□ -0.53
NEK3-203ENST00000551355 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
NEK3-203ENST00000551355 NFASCO94856 1347 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 KDM3AQ9Y4C1 1321 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 MYH15Q9Y2K3 1946 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 A0A1B0GVL5 298 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 CTAGE5O15320 804 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 COBLO75128 1261 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 ARP10275 920 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
NEK3-203ENST00000551355 MUTP22033 750 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 HOXD10P28358 340 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 NDUFA8P51970 172 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 C1QTNF8P60827 252 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
NEK3-203ENST00000551355 KRT76Q01546 638 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 SP3Q02447 781 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 OTOP1Q7RTM1 612 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
NEK3-203ENST00000551355 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.53
NEK3-203ENST00000551355 IQUBQ8NA54 791 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 RDM1Q8NG50 284 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 RASSF8Q8NHQ8 419 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 BEGAINQ9BUH8 593 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 NT5C3AQ9H0P0 336 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 VTA1Q9NP79 307 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
NEK3-203ENST00000551355 ASTN1O14525 1302 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 NR1I2O75469 434 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 TRPA1O75762 1119 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms