RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 NEDD9Q14511 834 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 SHHQ15465 462 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 GPR153Q6NV75 609 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 TMEM199Q8N511 208 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 MLXIPQ9HAP2 919 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 PCDHA6Q9UN73 950 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 PCDHA8Q9Y5H6 950 aa21.8■■□□□ 1.08
DDX54-208ENST00000551344 STXBP3O00186 592 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 PRPF3O43395 683 aaKnown RBP21.79■■□□□ 1.08
DDX54-208ENST00000551344 HOXD8P13378 290 aaPredicted RBP21.79■■□□□ 1.08
DDX54-208ENST00000551344 UBA1P22314 1058 aaKnown RBP21.79■■□□□ 1.08
DDX54-208ENST00000551344 UBE2SQ16763 222 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 PFKFB3Q16875 520 aaPredicted RBP21.79■■□□□ 1.08
DDX54-208ENST00000551344 TYW1BQ6NUM6 668 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 NLRX1Q86UT6 975 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 SPATA33Q96N06 139 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 SENP7Q9BQF6 1050 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 HIPK3Q9H422 1215 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 EHMT1Q9H9B1 1298 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 SCN10AQ9Y5Y9 1956 aa21.79■■□□□ 1.08
DDX54-208ENST00000551344 SMCO2A6NFE2 343 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 FOSP01100 380 aaPredicted RBP21.78■■□□□ 1.08
DDX54-208ENST00000551344 ANAPC15P60006 121 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 PPIGQ13427 754 aaKnown RBP eCLIP21.78■■□□□ 1.081e-6■□□□□ 10.6
DDX54-208ENST00000551344 TOB2Q14106 344 aaPredicted RBP21.78■■□□□ 1.08
DDX54-208ENST00000551344 HSDL1Q3SXM5 330 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 FAM47CQ5HY64 1035 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 KAT2BQ92831 832 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 ZNF274Q96GC6 653 aaPredicted RBP21.78■■□□□ 1.08
DDX54-208ENST00000551344 LRCH3Q96II8 777 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 KATNAL1Q9BW62 490 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 PPP1R12CQ9BZL4 782 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 TRMT13Q9NUP7 481 aaKnown RBP21.78■■□□□ 1.08
DDX54-208ENST00000551344 LAMA3Q16787 3333 aa21.78■■□□□ 1.08
DDX54-208ENST00000551344 MAFGO15525 162 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 SCG2P13521 617 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 ADCY7P51828 1080 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 EPHB4P54760 987 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 AKAP17AQ02040 695 aaKnown RBP21.77■■□□□ 1.08
DDX54-208ENST00000551344 NTRK3Q16288 839 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 C9orf50Q5SZB4 431 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 SESTD1Q86VW0 696 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 GIMAP8Q8ND71 665 aaPredicted RBP21.77■■□□□ 1.08
DDX54-208ENST00000551344 GPRASP2Q96D09 838 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 CDHR1Q96JP9 859 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 NOC4LQ9BVI4 516 aaKnown RBP21.77■■□□□ 1.08
DDX54-208ENST00000551344 UPF3BQ9BZI7 483 aaKnown RBP21.77■■□□□ 1.08
DDX54-208ENST00000551344 PDRG1Q9NUG6 133 aa21.77■■□□□ 1.08
DDX54-208ENST00000551344 IFNAR1P17181 557 aa21.76■■□□□ 1.07
DDX54-208ENST00000551344 CYP2C18P33260 490 aa21.76■■□□□ 1.07
DDX54-208ENST00000551344 SEMA3FQ13275 785 aa21.76■■□□□ 1.07
DDX54-208ENST00000551344 METTL7BQ6UX53 244 aa21.76■■□□□ 1.07
DDX54-208ENST00000551344 CCDC12Q8WUD4 166 aaPredicted RBP21.76■■□□□ 1.07
DDX54-208ENST00000551344 RNF26Q9BY78 433 aaPredicted RBP21.76■■□□□ 1.07
DDX54-208ENST00000551344 F2P00734 622 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 CSF2RAP15509 400 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 PSEN2P49810 448 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 CHMP4BP1P59074 171 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 CCT2P78371 535 aaKnown RBP21.75■■□□□ 1.07
DDX54-208ENST00000551344 PKN1Q16512 942 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 CYFIP1Q7L576 1253 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 UBIAD1Q9Y5Z9 338 aa21.75■■□□□ 1.07
DDX54-208ENST00000551344 MYH7BA7E2Y1 1941 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 ESYT2A0FGR8 921 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 HAS3O00219 553 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 NOP56O00567 594 aaKnown RBP21.74■■□□□ 1.07
DDX54-208ENST00000551344 SORBS3O60504 671 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 ITGB5P18084 799 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 CLK2P49760 499 aaKnown RBP21.74■■□□□ 1.07
DDX54-208ENST00000551344 AP3B2Q13367 1082 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 PHKBQ93100 1093 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 ZMYND12Q9H0C1 365 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 BCAS3Q9H6U6 928 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 JADE2Q9NQC1 790 aa21.74■■□□□ 1.07
DDX54-208ENST00000551344 CYP2C9P11712 490 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 MFSD10Q14728 455 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 PTGISQ16647 500 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 KIAA0753Q2KHM9 967 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 MCTP2Q6DN12 878 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 C16orf59Q7L2K0 433 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 C7orf31Q8N865 590 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 RNPC3Q96LT9 517 aaKnown RBP21.73■■□□□ 1.07
DDX54-208ENST00000551344 C16orf70Q9BSU1 422 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 C6orf50Q9HD87 102 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 IL23AQ9NPF7 189 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 NOD1Q9Y239 953 aa21.73■■□□□ 1.07
DDX54-208ENST00000551344 ZNF286BP0CG31 522 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 GNA11P29992 359 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 CCL23P55773 120 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 MTMR1Q13613 665 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 TMEM240Q5SV17 173 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
DDX54-208ENST00000551344 PPP1R13LQ8WUF5 828 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 IL17RAQ96F46 866 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.72■■□□□ 1.072e-6■■□□□ 13.8
DDX54-208ENST00000551344 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 SLC26A6Q9BXS9 759 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 ANO3Q9BYT9 981 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 NCOA5Q9HCD5 579 aaKnown RBP21.72■■□□□ 1.07
DDX54-208ENST00000551344 HDAC6Q9UBN7 1215 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms