RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CYP27A1Q02318 531 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 PAK1Q13153 545 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 SEPT7Q16181 437 aaKnown RBP7.02□□□□□ -1.29
CPSF6-206ENST00000550987 CDKAL1Q5VV42 579 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 SPATS2Q86XZ4 545 aaKnown RBP7.02□□□□□ -1.29
CPSF6-206ENST00000550987 FBXL6Q8N531 539 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 IGSF22Q8N9C0 903 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 CHAMP1Q96JM3 812 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 HEXIM2Q96MH2 286 aaKnown RBP7.02□□□□□ -1.29
CPSF6-206ENST00000550987 CABP5Q9NP86 173 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 GPR27Q9NS67 375 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 STOML1Q9UBI4 398 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 PNPLA6Q8IY17 1366 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 UGGT1Q9NYU2 1555 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 PKD1L2Q7Z442 2459 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 FAM135AQ9P2D6 1515 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 IGF2BP3O00425 579 aaKnown RBP eCLIP7.01□□□□□ -1.29
CPSF6-206ENST00000550987 NEMP1O14524 444 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 SYPP08247 313 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 PAMP19021 973 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 BMP8BP34820 402 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 ST5P78524 1137 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 PPP2R5AQ15172 486 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 ACBD5Q5T8D3 534 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-206ENST00000550987 EEF1DP3Q658K8 133 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 E4F1Q66K89 784 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-206ENST00000550987 LHFPL2Q6ZUX7 228 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 NPLOC4Q8TAT6 608 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.01□□□□□ -1.29
CPSF6-206ENST00000550987 HDAC8Q9BY41 377 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 GPR62Q9BZJ7 368 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 PUS7LQ9H0K6 701 aaKnown RBP7.01□□□□□ -1.29
CPSF6-206ENST00000550987 GEMIN8Q9NWZ8 242 aaKnown RBP7.01□□□□□ -1.29
CPSF6-206ENST00000550987 CAPN6Q9Y6Q1 641 aa7.01□□□□□ -1.29
CPSF6-206ENST00000550987 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 NPHP3-ACAD11A0A0J9YXS1 232 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 HMX2A2RU54 273 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 M0R2C6 588 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 GSTA4O15217 222 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 ZNF865P0CJ78 1059 aaPredicted RBP7□□□□□ -1.29
CPSF6-206ENST00000550987 COL8A1P27658 744 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 CYP4F3Q08477 520 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 KCNAB2Q13303 367 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 MTMR1Q13613 665 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 FAM47CQ5HY64 1035 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 IQSEC1Q6DN90 963 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 FAM214BQ7L5A3 538 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 ZAR1Q86SH2 424 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 C11orf74Q86VG3 221 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 KIF18BQ86Y91 864 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 CCAR1Q8IX12 1150 aaKnown RBP7□□□□□ -1.29
CPSF6-206ENST00000550987 RAVER1Q8IY67 606 aaKnown RBP7□□□□□ -1.29
CPSF6-206ENST00000550987 NXPE1Q8N323 547 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 CDADC1Q9BWV3 514 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 SLC12A9Q9BXP2 914 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 CCDC8Q9H0W5 538 aaPredicted RBP7□□□□□ -1.29
CPSF6-206ENST00000550987 AASDHPPTQ9NRN7 309 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 ZSWIM5Q9P217 1185 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 TMEFF2Q9UIK5 374 aaPredicted RBP7□□□□□ -1.29
CPSF6-206ENST00000550987 UGGT2Q9NYU1 1516 aa7□□□□□ -1.29
CPSF6-206ENST00000550987 MYO1BO43795 1136 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 FKTNO75072 461 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 ADMP35318 185 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 DNM2P50570 870 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 NEK2P51955 445 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 SKOR2Q2VWA4 1001 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-206ENST00000550987 RCSD1Q6JBY9 416 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 LBX2Q6XYB7 198 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 KRT27Q7Z3Y8 459 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 NAT16Q8N8M0 369 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 TSR2Q969E8 191 aaKnown RBP6.99□□□□□ -1.29
CPSF6-206ENST00000550987 GPR101Q96P66 508 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-206ENST00000550987 CAMKK2Q96RR4 588 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 ASPSCR1Q9BZE9 553 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-206ENST00000550987 TCFL5Q9UL49 500 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 APOBEC2Q9Y235 224 aaKnown RBP6.99□□□□□ -1.29
CPSF6-206ENST00000550987 RAXQ9Y2V3 346 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 COQ6Q9Y2Z9 468 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 PCDHA2Q9Y5H9 948 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 NPFFR2Q9Y5X5 522 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 ADAMTS7Q9UKP4 1686 aa6.99□□□□□ -1.29
CPSF6-206ENST00000550987 ZNF518AQ6AHZ1 1483 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 PARD3Q8TEW0 1356 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 CROCC2H7BZ55 1655 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 ZNF891A8MT65 544 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-206ENST00000550987 PRC1O43663 620 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 MSCO60682 206 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 GLRX3O76003 335 aaKnown RBP6.98□□□□□ -1.29
CPSF6-206ENST00000550987 TOMM70O94826 608 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 FKBP9O95302 570 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 F2P00734 622 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 LCP1P13796 627 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 KCNA6P17658 529 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 TPP2P29144 1249 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-206ENST00000550987 ID4P47928 161 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 OCRLQ01968 901 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 KIZQ2M2Z5 673 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 NBPF8Q3BBV2 869 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms