RNA–Protein interactions for RNA: ENST00000550925.2

SH2B3-203, Transcript of SH2B adaptor protein 3, humanhuman

TSL 5

Gene SH2B3, Length 648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-203ENST00000550925 ATP6V1DQ9Y5K8 247 aa23.58■■□□□ 1.37
SH2B3-203ENST00000550925 TBX3O15119 743 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 SLC37A4O43826 429 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 FOXD4L5Q5VV16 416 aaPredicted RBP23.57■■□□□ 1.36
SH2B3-203ENST00000550925 IQSEC1Q6DN90 963 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 CCDC62Q6P9F0 684 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 FOXD4L4Q8WXT5 416 aaPredicted RBP23.57■■□□□ 1.36
SH2B3-203ENST00000550925 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 SENP7Q9BQF6 1050 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 WDR11Q9BZH6 1224 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.57■■□□□ 1.36
SH2B3-203ENST00000550925 MRVI1Q9Y6F6 885 aa23.57■■□□□ 1.36
SH2B3-203ENST00000550925 SEPT4O43236 478 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 NEMFO60524 1076 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 BMP15O95972 392 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 AKR1A1P14550 325 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 ATP2B1P20020 1258 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 CCDC144BQ3MJ40 725 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 PRAMEF19Q5SWL8 479 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 ATL3Q6DD88 541 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 ETNPPLQ8TBG4 499 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 SH3TC2Q8TF17 1288 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 AGO4Q9HCK5 861 aaKnown RBP23.56■■□□□ 1.36
SH2B3-203ENST00000550925 KCNMB3Q9NPA1 279 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 PDGFCQ9NRA1 345 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 FAM184BQ9ULE4 1060 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 PCDHB6Q9Y5E3 794 aa23.56■■□□□ 1.36
SH2B3-203ENST00000550925 NKRFO15226 690 aaKnown RBP eCLIP23.55■■□□□ 1.36
SH2B3-203ENST00000550925 ARP10275 920 aa23.55■■□□□ 1.36
SH2B3-203ENST00000550925 MCM7P33993 719 aa23.55■■□□□ 1.36
SH2B3-203ENST00000550925 ADCYAP1R1P41586 468 aa23.55■■□□□ 1.36
SH2B3-203ENST00000550925 NBR1Q14596 966 aa23.55■■□□□ 1.36
SH2B3-203ENST00000550925 DUSP28Q4G0W2 176 aa23.55■■□□□ 1.36
SH2B3-203ENST00000550925 FAM173BQ6P4H8 233 aa23.55■■□□□ 1.36
SH2B3-203ENST00000550925 ZNF396Q96N95 335 aaPredicted RBP23.55■■□□□ 1.36
SH2B3-203ENST00000550925 DDX41Q9UJV9 622 aaKnown RBP23.55■■□□□ 1.36
SH2B3-203ENST00000550925 LAD1O00515 517 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 MSH4O15457 936 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 ARIH2O95376 493 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 KCNA2P16389 499 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 UBA1P22314 1058 aaKnown RBP23.54■■□□□ 1.36
SH2B3-203ENST00000550925 ZNF174Q15697 407 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 POTEDQ86YR6 584 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 GIMAP8Q8ND71 665 aaPredicted RBP23.54■■□□□ 1.36
SH2B3-203ENST00000550925 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 FAM20AQ96MK3 541 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 POLR3EQ9NVU0 708 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 MORC2Q9Y6X9 1032 aaPredicted RBP23.54■■□□□ 1.36
SH2B3-203ENST00000550925 NFASCO94856 1347 aa23.54■■□□□ 1.36
SH2B3-203ENST00000550925 TXNP10599 105 aaKnown RBP23.53■■□□□ 1.36
SH2B3-203ENST00000550925 CCND3P30281 292 aaPredicted RBP23.53■■□□□ 1.36
SH2B3-203ENST00000550925 NEDD9Q14511 834 aa23.53■■□□□ 1.36
SH2B3-203ENST00000550925 ZNF333Q96JL9 665 aa23.53■■□□□ 1.36
SH2B3-203ENST00000550925 RIT2Q99578 217 aa23.53■■□□□ 1.36
SH2B3-203ENST00000550925 ZNF577Q9BSK1 485 aa23.53■■□□□ 1.36
SH2B3-203ENST00000550925 HMX1Q9NP08 348 aaPredicted RBP23.53■■□□□ 1.36
SH2B3-203ENST00000550925 CEP131Q9UPN4 1083 aa23.53■■□□□ 1.36
SH2B3-203ENST00000550925 GNEQ9Y223 722 aaKnown RBP23.53■■□□□ 1.36
SH2B3-203ENST00000550925 FRMPD3Q5JV73 1810 aa23.53■■□□□ 1.36
SH2B3-203ENST00000550925 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.52■■□□□ 1.36
SH2B3-203ENST00000550925 IPO5O00410 1097 aaKnown RBP23.52■■□□□ 1.36
SH2B3-203ENST00000550925 MSCO60682 206 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 SMPD1P17405 629 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 NASPP49321 788 aaPredicted RBP23.52■■□□□ 1.36
SH2B3-203ENST00000550925 ATP2C1P98194 919 aaPredicted RBP23.52■■□□□ 1.36
SH2B3-203ENST00000550925 TNFAIP2Q03169 654 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 ITGB3BPQ13352 177 aaPredicted RBP23.52■■□□□ 1.36
SH2B3-203ENST00000550925 CALCRLQ16602 461 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 ANO1Q5XXA6 986 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 SLFN12Q8IYM2 578 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 C4orf32Q8N8J7 132 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 HAS1Q92839 578 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 EMID1Q96A84 441 aaPredicted RBP23.52■■□□□ 1.36
SH2B3-203ENST00000550925 MTMR9Q96QG7 549 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 MCOLN1Q9GZU1 580 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 TBC1D22BQ9NU19 505 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 Q9Y3F1 56 aa23.52■■□□□ 1.36
SH2B3-203ENST00000550925 ADCY6O43306 1168 aa23.51■■□□□ 1.35
SH2B3-203ENST00000550925 ATP9AO75110 1047 aa23.51■■□□□ 1.35
SH2B3-203ENST00000550925 DUSP11O75319 330 aaKnown RBP23.51■■□□□ 1.35
SH2B3-203ENST00000550925 OR52Z1P0C646 297 aa23.51■■□□□ 1.35
SH2B3-203ENST00000550925 SP2Q02086 613 aa23.51■■□□□ 1.35
SH2B3-203ENST00000550925 USP28Q96RU2 1077 aa23.51■■□□□ 1.35
SH2B3-203ENST00000550925 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.51■■□□□ 1.355e-6■■□□□ 12.9
SH2B3-203ENST00000550925 TMEM60Q9H2L4 133 aa23.51■■□□□ 1.35
SH2B3-203ENST00000550925 PAK6Q9NQU5 681 aaPredicted RBP23.51■■□□□ 1.35
SH2B3-203ENST00000550925 DDX20Q9UHI6 824 aaKnown RBP23.51■■□□□ 1.35
SH2B3-203ENST00000550925 DOCK5Q9H7D0 1870 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 DHX15O43143 795 aaKnown RBP23.5■■□□□ 1.35
SH2B3-203ENST00000550925 GH1P01241 217 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 PRPHP41219 470 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 PTGDRQ13258 359 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 PTPAQ15257 358 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 SF3A1Q15459 793 aaKnown RBP23.5■■□□□ 1.35
SH2B3-203ENST00000550925 LY6KQ17RY6 165 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 CELF3Q5SZQ8 465 aaKnown RBP23.5■■□□□ 1.35
SH2B3-203ENST00000550925 METTL7BQ6UX53 244 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 SDF4Q9BRK5 362 aa23.5■■□□□ 1.35
SH2B3-203ENST00000550925 PSMD10O75832 226 aa23.49■■□□□ 1.35
SH2B3-203ENST00000550925 FARP2O94887 1054 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms