RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 CCDC194A0A1B0GVG4 234 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 WNT7AO00755 349 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 CFBP00751 764 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 LCTP09848 1927 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 AKR1A1P14550 325 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 SREBF1P36956 1147 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 USP11P51784 963 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
ERBB3-216ENST00000550869 KRT85P78386 507 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.21
ERBB3-216ENST00000550869 PTPAQ15257 358 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 TRIM60Q495X7 471 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 PRAMEF19Q5SWL8 479 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 CUL9Q8IWT3 2517 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
ERBB3-216ENST00000550869 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 ANO3Q9BYT9 981 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
ERBB3-216ENST00000550869 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.21
ERBB3-216ENST00000550869 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 CNPY2Q9Y2B0 182 aa13.77□□□□□ -0.21
ERBB3-216ENST00000550869 YEATS4O95619 227 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 PGK2P07205 417 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 CYP3A4P08684 503 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 HOXA13P31271 388 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 CIITAP33076 1130 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 INF2Q27J81 1249 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 LINC00301Q8NCQ3 95 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 MBOAT7Q96N66 472 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 TSEN34Q9BSV6 310 aaKnown RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 SCAND2PQ9GZW5 306 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 PRDM5Q9NQX1 630 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 HOMER2Q9NSB8 354 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 CYP39A1Q9NYL5 469 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
ERBB3-216ENST00000550869 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 CLIC4Q9Y696 253 aa13.76□□□□□ -0.21
ERBB3-216ENST00000550869 ELP1O95163 1332 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 DNAJC25-GNG10A0A024R161 153 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 CYP3A7-CYP3A51PA0A087WV96 503 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 ZNF865P0CJ78 1059 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 CYP3A7P24462 503 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 ORC2Q13416 577 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 BAATQ14032 418 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 MAMDC4Q6UXC1 1216 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 LEO1Q8WVC0 666 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 PGBD1Q96JS3 809 aa13.75□□□□□ -0.21
ERBB3-216ENST00000550869 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERBB3-216ENST00000550869 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 CLTBP09497 229 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 MCM4P33991 863 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 ARHGAP4P98171 946 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 NBR1Q14596 966 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 SF3A1Q15459 793 aaKnown RBP13.74□□□□□ -0.21
ERBB3-216ENST00000550869 SLC30A10Q6XR72 485 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 BADQ92934 168 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 FERMT2Q96AC1 680 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 TAAR1Q96RJ0 339 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 VCANP13611 3396 aa13.74□□□□□ -0.21
ERBB3-216ENST00000550869 A0A1W2PQ45 241 aaPredicted RBP13.73□□□□□ -0.21
ERBB3-216ENST00000550869 A0A1W2PQY0 241 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 MOXD2PA6NHM9 499 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 KIAA0355O15063 1070 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 PPP6R2O75170 966 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 BMP15O95972 392 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
ERBB3-216ENST00000550869 TLE2Q04725 743 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 SHHQ15465 462 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 NSMFQ6X4W1 530 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 FCHSD1Q86WN1 690 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 DNERQ8NFT8 737 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 GUCD1Q96NT3 240 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
ERBB3-216ENST00000550869 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
ERBB3-216ENST00000550869 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 PRUNE2Q8WUY3 3088 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 TMEM265A0A087WTH1 108 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms