RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	NOM1	Q5C9Z4	860 aa	Known RBP	10.85	□□□□□ -0.67
TUBA1A-208	ENST00000550811	SOCS4	Q8WXH5	440 aa		10.85	□□□□□ -0.67
TUBA1A-208	ENST00000550811	PGBD1	Q96JS3	809 aa		10.85	□□□□□ -0.67
TUBA1A-208	ENST00000550811	WBP1L	Q9NX94	342 aa		10.85	□□□□□ -0.67
TUBA1A-208	ENST00000550811	COL20A1	Q9P218	1284 aa		10.85	□□□□□ -0.67
TUBA1A-208	ENST00000550811	ZDHHC9	Q9Y397	364 aa		10.85	□□□□□ -0.67
TUBA1A-208	ENST00000550811	FRMPD4	Q14CM0	1322 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	RPTOR	Q8N122	1335 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	DNAJC25-GNG10	A0A024R161	153 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	FAM205C	A6NFA0	338 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	GPR25	O00155	361 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	PGK2	P07205	417 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	PTPRE	P23469	700 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	SREBF1	P36956	1147 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	INF2	Q27J81	1249 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	EARS2	Q5JPH6	523 aa	Known RBP	10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	DNER	Q8NFT8	737 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	TBCK	Q8TEA7	893 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	ADAM33	Q9BZ11	813 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	PXMP2	Q9NR77	195 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	ADD3	Q9UEY8	706 aa	Known RBP	10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	NOL7	Q9UMY1	257 aa	Known RBP	10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	ATP6V1D	Q9Y5K8	247 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	CEP350	Q5VT06	3117 aa		10.84	□□□□□ -0.67
TUBA1A-208	ENST00000550811	FKTN	O75072	461 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	EIF2AK2	P19525	551 aa	Known RBP	10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SOX11	P35716	441 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PSMC4	P43686	418 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TRAPPC10	P48553	1259 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ALDH5A1	P51649	535 aa	Predicted RBP	10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ARHGAP4	P98171	946 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CNTN2	Q02246	1040 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	RILPL1	Q5EBL4	403 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MORN1	Q5T089	497 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ARHGEF16	Q5VV41	709 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NEK8	Q86SG6	692 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PACS2	Q86VP3	889 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FAM133A	Q8N9E0	248 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NSUN6	Q8TEA1	469 aa	Known RBP	10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ERO1A	Q96HE7	468 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TRIM47	Q96LD4	638 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TAAR1	Q96RJ0	339 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	RMDN3	Q96TC7	470 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MPHOSPH6	Q99547	160 aa	Known RBP	10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	APBA2	Q99767	749 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NUDT12	Q9BQG2	462 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ARHGAP39	Q9C0H5	1083 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SLC5A4	Q9NY91	659 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TSKS	Q9UJT2	592 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MCM3AP	O60318	1980 aa		10.83	□□□□□ -0.68
TUBA1A-208	ENST00000550811		B4DLN1	442 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CTGF	P29279	349 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	RGS2	P41220	211 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	UBXN2A	P68543	259 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PGM5	Q15124	567 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ZNF792	Q3KQV3	632 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	DPP9	Q86TI2	863 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	JMY	Q8N9B5	988 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CD99L2	Q8TCZ2	262 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PURB	Q96QR8	312 aa	Known RBP	10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ASTN1	O14525	1302 aa		10.82	□□□□□ -0.68
TUBA1A-208	ENST00000550811	LOC102724159	A0A0B4J2E5	919 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SOWAHB	A6NEL2	793 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	POM121C	A8CG34	1229 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	COBL	O75128	1261 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	GNRH1	P01148	92 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	GCFC2	P16383	781 aa	Known RBP	10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CCND2	P30279	289 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ARHGEF6	Q15052	776 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PWP2	Q15269	919 aa	Known RBP	10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	QPCT	Q16769	361 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	LETM2	Q2VYF4	491 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TTC38	Q5R3I4	469 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PCNX4	Q63HM2	1172 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	XRRA1	Q6P2D8	792 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FAM173B	Q6P4H8	233 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MOXD1	Q6UVY6	613 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	IL31RA	Q8NI17	732 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CRYGN	Q8WXF5	182 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FGD4	Q96M96	766 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ZNF396	Q96N95	335 aa	Predicted RBP	10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	IWS1	Q96ST2	819 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NAP1L4	Q99733	375 aa	Known RBP	10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PDCD2L	Q9BRP1	358 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TMEM134	Q9H6X4	195 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	DIS3	Q9Y2L1	958 aa	Known RBP	10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	KIAA1217	Q5T5P2	1943 aa		10.81	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TCHH	Q07283	1943 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ASB14	A6NK59	587 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CCNT1	O60563	726 aa	Known RBP	10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NR3C2	P08235	984 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CYP3A4	P08684	503 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	HOXC6	P09630	235 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MYCL	P12524	364 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ATP2B1	P20020	1258 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	EDNRB	P24530	442 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	HOXD10	P28358	340 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ZNF76	P36508	570 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TOB1	P50616	345 aa	Predicted RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms