RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 VAV2P52735 878 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 RASSF7Q02833 373 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 HERC4Q5GLZ8 1057 aaPredicted RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PVALEFA0A1B0GWK0 134 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 POLRMTO00411 1230 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 ZBTB5O15062 677 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 SMARCA1P28370 1054 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PPP1R2P41236 205 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 GUF1Q8N442 669 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 HNRNPLLQ8WVV9 542 aaKnown RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 ZNF622Q969S3 477 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 GBP3Q9H0R5 595 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
UBE2N-205ENST00000550657 PODXL2Q9NZ53 605 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 SIK3Q9Y2K2 1263 aa10.2□□□□□ -0.78
UBE2N-205ENST00000550657 MYH8P13535 1937 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 A0A0U1RQG5 324 aaPredicted RBP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 GDF11O95390 407 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 ADRA2BP18089 450 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 MAGEA1P43355 309 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 USP14P54578 494 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 SKIDA1Q1XH10 827 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 QRICH1Q2TAL8 776 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 FAM26FQ5R3K3 315 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 NFRKBQ6P4R8 1299 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 GPBP1Q86WP2 473 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 COA1Q9GZY4 146 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 COL24A1Q17RW2 1714 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 CCDC88AQ3V6T2 1871 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 TACC1O75410 805 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 PDIA5Q14554 519 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 EZH2Q15910 746 aaKnown RBP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 PRR16Q569H4 304 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 PAPD7Q5XG87 772 aaKnown RBP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 MSL1Q68DK7 614 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 POTEGQ6S5H5 508 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 TEKT1Q969V4 418 aa10.19□□□□□ -0.78
UBE2N-205ENST00000550657 LSM14BQ9BX40 385 aaKnown RBP10.19□□□□□ -0.78
UBE2N-205ENST00000550657 NHSQ6T4R5 1651 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 PLA2G4BP0C869 781 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 SNHG28P0DPA3 235 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 EEF2P13639 858 aaKnown RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 EPS15P42566 896 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 POLR2FP61218 127 aaKnown RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 SLC7A5Q01650 507 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 CKAP4Q07065 602 aaKnown RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 LRRC55Q6ZSA7 311 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 PLAGL2Q9UPG8 496 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 AFF2P51816 1311 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 IGKV6D-41A0A0C4DH26 115 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 hCG_1984214I3L0E3 225 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 MYBL2P10244 700 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 RNASE9P60153 205 aaKnown RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 LRRC63Q05C16 580 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 PTPROQ16827 1216 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 TMEM119Q4V9L6 283 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 CCDC181Q5TID7 509 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 SLC30A10Q6XR72 485 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 CCDC84Q86UT8 332 aaPredicted RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 SP8Q8IXZ3 490 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 ZNF713Q8N859 430 aaPredicted RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 DNAJC19Q96DA6 116 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 CRAMP1Q96RY5 1269 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 TMX4Q9H1E5 349 aaPredicted RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 SALL4Q9UJQ4 1053 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 ATP6V0A2Q9Y487 856 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 COL4A3BPQ9Y5P4 624 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 MAST2Q6P0Q8 1798 aa10.18□□□□□ -0.78
UBE2N-205ENST00000550657 DDX60LQ5H9U9 1706 aaKnown RBP10.18□□□□□ -0.78
UBE2N-205ENST00000550657 A0A1W2PQJ5 194 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
UBE2N-205ENST00000550657 CRKP46108 304 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 NOVP48745 357 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 FKBP3Q00688 224 aaKnown RBP10.17□□□□□ -0.78
UBE2N-205ENST00000550657 CYP4A11Q02928 519 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.782e-7■■□□□ 11.4
UBE2N-205ENST00000550657 RAPGEF1Q13905 1077 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 SEPT2Q15019 361 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 CDC37Q16543 378 aaPredicted RBP10.17□□□□□ -0.78
UBE2N-205ENST00000550657 GPATCH4Q5T3I0 446 aaKnown RBP10.17□□□□□ -0.78
UBE2N-205ENST00000550657 SLFN13Q68D06 897 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 PPP4R3AQ6IN85 833 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 SPICE1Q8N0Z3 855 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 TSGA10Q9BZW7 698 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 SH2D4AQ9H788 454 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 THSD7AQ9UPZ6 1657 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 NAV1Q8NEY1 1877 aa10.17□□□□□ -0.78
UBE2N-205ENST00000550657 DDTLA6NHG4 134 aaPredicted RBP10.17□□□□□ -0.78
UBE2N-205ENST00000550657 ZBTB22O15209 634 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms