RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 PCDHA11Q9Y5I1 949 aa6.8□□□□□ -1.32
RAB3IP-213ENST00000550647 X6R8D5 127 aa6.8□□□□□ -1.32
RAB3IP-213ENST00000550647 LOC102724159A0A0B4J2E5 919 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 PEX14O75381 377 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 EIF3JO75822 258 aaKnown RBP6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 ZSCAN20P17040 1043 aaPredicted RBP6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 CHRNA4P43681 627 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 MLC1Q15049 377 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 PWP2Q15269 919 aaKnown RBP6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 TERF2Q15554 542 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 DDB1Q16531 1140 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 IFI16Q16666 785 aaKnown RBP6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 PTPN21Q16825 1174 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 ABCB5Q2M3G0 1257 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 CDKAL1Q5VV42 579 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 C14orf80Q86SX3 495 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 RASSF3Q86WH2 238 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 TMEM52Q8NDY8 209 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 C1orf162Q8NEQ5 155 aaPredicted RBP6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 NLGN2Q8NFZ4 835 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 JPH3Q8WXH2 748 aaPredicted RBP6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 DPF3Q92784 378 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 PMM1Q92871 262 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 SLC39A13Q96H72 371 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 DCAF5Q96JK2 942 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 MFSD14AQ96MC6 490 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 CDADC1Q9BWV3 514 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
RAB3IP-213ENST00000550647 SLC12A8A0AV02 714 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 WASH4PA8MWX3 477 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 H3BS24 57 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 H7C1D1 291 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 GSC2O15499 205 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 PLIN1O60240 522 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CFBP00751 764 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 ESR1P03372 595 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 AMY2AP04746 511 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 KRT18P05783 430 aaKnown RBP6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 MYL1P05976 194 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 PDE6AP16499 860 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 AMY2BP19961 511 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 GRIK1P39086 918 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 BCL6P41182 706 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 RECQLP46063 649 aaPredicted RBP6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CORO7P57737 925 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 NFIAQ12857 509 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 GFOD2Q3B7J2 385 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 HLA-DQA1Q5Y7H0 255 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CD163Q86VB7 1156 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CPNE8Q86YQ8 564 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 SMC5Q8IY18 1101 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CPA6Q8N4T0 437 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CISD2Q8N5K1 135 aaKnown RBP6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 UBE2FQ969M7 185 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 NUP88Q99567 741 aaPredicted RBP6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CATSPERZQ9NTU4 200 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 CLDND1Q9NY35 253 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
RAB3IP-213ENST00000550647 WASHC2AQ641Q2 1341 aa6.77□□□□□ -1.32
RAB3IP-213ENST00000550647 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 LTKP29376 864 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 IARSP41252 1262 aaKnown RBP6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 SMAD3P84022 425 aaKnown RBP6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 LAPTM5Q13571 262 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 LRRC32Q14392 662 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 GORABQ5T7V8 394 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 BROXQ5VW32 411 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 ARHGAP27Q6ZUM4 889 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 HDGFL2Q7Z4V5 671 aaPredicted RBP6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 SLC51AQ86UW1 340 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 DGKHQ86XP1 1220 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 RIOX2Q8IUF8 465 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 NOSTRINQ8IVI9 506 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 NAT16Q8N8M0 369 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 ZNF610Q8N9Z0 462 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 EPB41L1Q9H4G0 881 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 TNFRSF10DQ9UBN6 386 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 ANKRD6Q9Y2G4 727 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 GIT1Q9Y2X7 761 aa6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 LUC7L2Q9Y383 392 aaKnown RBP6.77□□□□□ -1.33
RAB3IP-213ENST00000550647 WTIPA6NIX2 430 aaPredicted RBP6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 PRPF3O43395 683 aaKnown RBP6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 FKTNO75072 461 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 SNUPNO95149 360 aaKnown RBP6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 MYBL2P10244 700 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 VCAM1P19320 739 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 LSP1P33241 339 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 JAM2P57087 298 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 SPIRE1Q08AE8 756 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 FIGNQ5HY92 759 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 OTOP3Q7RTS5 596 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 FBXL6Q8N531 539 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 NETO1Q8TDF5 533 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 DLG3Q92796 817 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 TP53INP1Q96A56 240 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 TMEM169Q96HH4 297 aa6.76□□□□□ -1.33
RAB3IP-213ENST00000550647 FAXDC2Q96IV6 333 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms