RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ITPRIPQ8IWB1 547 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 SPACA3Q8IXA5 215 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 MRPL41Q8IXM3 137 aaKnown RBP7.16□□□□□ -1.26
SCAF11-213ENST00000550629 CNBD1Q8NA66 436 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 GATAD2BQ8WXI9 593 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 TMEM87BQ96K49 555 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 DPH2Q9BQC3 489 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-213ENST00000550629 PDGFDQ9GZP0 370 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-213ENST00000550629 USP44Q9H0E7 712 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 C9orf78Q9NZ63 289 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-213ENST00000550629 TRMT112Q9UI30 125 aaKnown RBP7.16□□□□□ -1.26
SCAF11-213ENST00000550629 TPX2Q9ULW0 747 aaKnown RBP7.16□□□□□ -1.26
SCAF11-213ENST00000550629 MAPK8IP1Q9UQF2 711 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 CORINQ9Y5Q5 1042 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 SH3TC1Q8TE82 1336 aa7.16□□□□□ -1.26
SCAF11-213ENST00000550629 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 SERPINB2P05120 415 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 UBTFL1P0CB47 393 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-213ENST00000550629 FUT4P22083 530 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 CASP7P55210 303 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 ST5P78524 1137 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 PDE4BQ07343 736 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 PWP1Q13610 501 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 C20orf194Q5TEA3 1177 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 UBE3BQ7Z3V4 1068 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 ATG4DQ86TL0 474 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-213ENST00000550629 FAM168AQ92567 244 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 ACSF2Q96CM8 615 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-213ENST00000550629 PLA2G12BQ9BX93 195 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 SPON1Q9HCB6 807 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 COPRSQ9NQ92 184 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 KBTBD4Q9NVX7 518 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 TNNQ9UQP3 1299 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 SNX11Q9Y5W9 270 aa7.15□□□□□ -1.26
SCAF11-213ENST00000550629 NRXN2Q9P2S2 1712 aa7.15□□□□□ -1.27
SCAF11-213ENST00000550629 KLRG2A4D1S0 409 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ZBTB7AO95365 584 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 BPNT1O95861 308 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 GNAI2P04899 355 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-213ENST00000550629 GARTP22102 1010 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ZNF124Q15973 351 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ERICH6BQ5W0A0 696 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 SLC6A19Q695T7 634 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 PRR5LQ6MZQ0 368 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ERMP1Q7Z2K6 904 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 MCATQ8IVS2 390 aaKnown RBP7.14□□□□□ -1.27
SCAF11-213ENST00000550629 GOLM1Q8NBJ4 401 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 RTL9Q8NET4 1388 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 FAM89AQ96GI7 184 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 BRIP1Q9BX63 1249 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ZBTB40Q9NUA8 1239 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 ADAM30Q9UKF2 790 aa7.14□□□□□ -1.27
SCAF11-213ENST00000550629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-213ENST00000550629 C10orf71Q711Q0 1435 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 IRS4O14654 1257 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-213ENST00000550629 NPHP1O15259 732 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-213ENST00000550629 NBPF7P0C2Y1 421 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-213ENST00000550629 PLCG1P19174 1290 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 PDE6BP35913 854 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 MTX1Q13505 466 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 RABL6Q3YEC7 729 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-213ENST00000550629 CRY2Q49AN0 593 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 SNAP47Q5SQN1 464 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 SFRP5Q5T4F7 317 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 MEIS3Q99687 375 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 AFDNP55196 1824 aaKnown RBP7.13□□□□□ -1.27
SCAF11-213ENST00000550629 LAMB2P55268 1798 aa7.13□□□□□ -1.27
SCAF11-213ENST00000550629 ABCC12Q96J65 1359 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 UPK3BL1B0FP48 263 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 UPK3BL2E5RIL1 263 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 PDE8AO60658 829 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 CSF1RP07333 972 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 RNASE1P07998 156 aaKnown RBP7.12□□□□□ -1.27
SCAF11-213ENST00000550629 ZNF865P0CJ78 1059 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-213ENST00000550629 CTSWP56202 376 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 FOXO4P98177 505 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 SF3B3Q15393 1217 aaKnown RBP7.12□□□□□ -1.27
SCAF11-213ENST00000550629 C22orf34Q6ZV56 151 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 KSR1Q8IVT5 923 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 RPAP2Q8IXW5 612 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-213ENST00000550629 FBXO27Q8NI29 283 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 PI4K2BQ8TCG2 481 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 CRBNQ96SW2 442 aa7.12□□□□□ -1.27
SCAF11-213ENST00000550629 MBNL3Q9NUK0 354 aaKnown RBP7.12□□□□□ -1.27
SCAF11-213ENST00000550629 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 CLCN7P51798 805 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 TGFB2P61812 414 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 CCDC152Q4G0S7 254 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 LDLRAD1Q5T700 205 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 ANGEL2Q5VTE6 544 aaKnown RBP7.11□□□□□ -1.27
SCAF11-213ENST00000550629 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-213ENST00000550629 FBXL19Q6PCT2 694 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 MFSD4AQ8N468 514 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 LRRN4CLQ8ND94 238 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms