RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 CYP2D7A0A087X1C5 515 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 A0A1B0GTH6 734 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 KLRF2D3W0D1 207 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 PSMA7O14818 248 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 IPO7O95373 1038 aaKnown RBP4.89□□□□□ -1.63
CCDC59-204ENST00000550589 FGFR1OPO95684 399 aaKnown RBP4.89□□□□□ -1.63
CCDC59-204ENST00000550589 ATP1A3P13637 1013 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 ZNF18P17022 549 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 HOXA10P31260 410 aaPredicted RBP4.89□□□□□ -1.63
CCDC59-204ENST00000550589 BTDP43251 543 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 NAPAP54920 295 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 DPYDQ12882 1025 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 PAK1Q13153 545 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 KCNB1Q14721 858 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 NR1I3Q14994 352 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 NONOQ15233 471 aaKnown RBP eCLIP4.89□□□□□ -1.63
CCDC59-204ENST00000550589 ASPRV1Q53RT3 343 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 MCTP2Q6DN12 878 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 PRR5LQ6MZQ0 368 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 ARMCX5Q6P1M9 558 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 SP8Q8IXZ3 490 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 MNS1Q8NEH6 495 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 UBXN4Q92575 508 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 EPSTI1Q96J88 318 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 PPP1R13BQ96KQ4 1090 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 CALR3Q96L12 384 aaKnown RBP4.89□□□□□ -1.63
CCDC59-204ENST00000550589 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 CCSER1Q9C0I3 900 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 ZMYND12Q9H0C1 365 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 TMX1Q9H3N1 280 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 DISC1Q9NRI5 854 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 NOD1Q9Y239 953 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 DUOX1Q9NRD9 1551 aa4.89□□□□□ -1.63
CCDC59-204ENST00000550589 ITIH6Q6UXX5 1313 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MYO3BQ8WXR4 1341 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 ESYT2A0FGR8 921 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 LRRC10BA6NIK2 292 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 N4BP3O15049 544 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 KIF5CO60282 957 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 CASQ1P31415 396 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 PDE6BP35913 854 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 CDK8P49336 464 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 KCNQ4P56696 695 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TRAF1Q13077 416 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 DBN1Q16643 649 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 PLA2G4EQ3MJ16 856 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 C4orf17Q53FE4 359 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 GPATCH4Q5T3I0 446 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 E4F1Q66K89 784 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 RCSD1Q6JBY9 416 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 KLHL10Q6JEL2 608 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 NEK8Q86SG6 692 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TMTC1Q8IUR5 882 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 VWA5B2Q8N398 1253 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TXLNBQ8N3L3 684 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 IGSF22Q8N9C0 903 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 SH3RF3Q8TEJ3 882 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 ZNF384Q8TF68 577 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 ANKRD7Q92527 254 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TNFRSF25Q93038 417 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 CDK5RAP3Q96JB5 506 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TMEM47Q9BQJ4 181 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 NUP58Q9BVL2 599 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MAD2L2Q9UI95 211 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TTF2Q9UNY4 1162 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 BCORQ6W2J9 1755 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 COL1A1P02452 1464 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MYH15Q9Y2K3 1946 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 FAM205AQ6ZU69 1335 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 A0A087WWV3 80 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 hCG_1642624A0A1W2PR95 340 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 SMCO2A6NFE2 343 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 UBE2Q2LH0YL09 131 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MARCH6O60337 910 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 NMT2O60551 498 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 CCNT1O60563 726 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 KIF20AO95235 890 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TTLL1O95922 423 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 RPN1P04843 607 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TUBBP07437 444 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 EEF1GP26641 437 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 KLRK1P26718 216 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 PHKA2P46019 1235 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MRPL12P52815 198 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 SMTNP53814 917 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 EPHA4P54764 986 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 GPSM2P81274 684 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MTFR1Q15390 333 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 WDR44Q5JSH3 913 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 JAKMIP3Q5VZ66 844 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 CNNM4Q6P4Q7 775 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 TXNRD3Q86VQ6 643 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 MAPKAPK5Q8IW41 473 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 REXO1Q8N1G1 1221 aaKnown RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 RETREG2Q8NC44 543 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 ZNF397Q8NF99 534 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 DHTKD1Q96HY7 919 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-204ENST00000550589 CCDC17Q96LX7 622 aa4.88□□□□□ -1.63
CCDC59-204ENST00000550589 RTFDC1Q9BY42 306 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms