RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	TCHH	Q07283	1943 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	IGLV3-22	A0A075B6J6	115 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	SOWAHB	A6NEL2	793 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	EDIL3	O43854	480 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	ITGB5	P18084	799 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	CMA1	P23946	247 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	EDNRB	P24530	442 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	RGS2	P41220	211 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	MRPS9	P82933	396 aa	Known RBP	13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	LACTB	P83111	547 aa	Predicted RBP	13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	SP3	Q02447	781 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	ARHGEF6	Q15052	776 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	ZNF792	Q3KQV3	632 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	TPRN	Q4KMQ1	711 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	MSL3	Q8N5Y2	521 aa	Known RBP	13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	MRPS27	Q92552	414 aa	Known RBP	13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	INPP4A	Q96PE3	977 aa	Predicted RBP	13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	MTMR9	Q96QG7	549 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	ZNF577	Q9BSK1	485 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	WDR11	Q9BZH6	1224 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	R3HDML	Q9H3Y0	253 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	TTC12	Q9H892	705 aa	Predicted RBP	13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	PCDHA12	Q9UN75	941 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	STK24	Q9Y6E0	443 aa		13.12	□□□□□ -0.31
CNOT2-223	ENST00000550160	ZNF236	Q9UL36	1845 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	IPO5	O00410	1097 aa	Known RBP	13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	GAS7	O60861	476 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	HOXD10	P28358	340 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	PSMC4	P43686	418 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	FXR2	P51116	673 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	PDIA5	Q14554	519 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	MORN1	Q5T089	497 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	ERMN	Q8TAM6	284 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	ETNPPL	Q8TBG4	499 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	LENG9	Q96B70	501 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	CLIC6	Q96NY7	704 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	RIT2	Q99578	217 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	APBA2	Q99767	749 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	PYM1	Q9BRP8	204 aa	Known RBP	13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	TEKT3	Q9BXF9	490 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	CSRNP2	Q9H175	543 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	KCNH7	Q9NS40	1196 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	TBC1D22B	Q9NU19	505 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	MRVI1	Q9Y6F6	885 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	PLXNB2	O15031	1838 aa		13.11	□□□□□ -0.31
CNOT2-223	ENST00000550160	MSH4	O15457	936 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	COBL	O75128	1261 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	GADD45B	O75293	160 aa	Predicted RBP	13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	HOXC6	P09630	235 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	UBA7	P41226	1012 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	TEC	P42680	631 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	LRCH2	Q5VUJ6	765 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	RESP18	Q5W5W9	173 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	KCNV1	Q6PIU1	500 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	ARMCX2	Q7L311	632 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	FSIP1	Q8NA03	581 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	RASSF8	Q8NHQ8	419 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	CYP2W1	Q8TAV3	490 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	MORC4	Q8TE76	937 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	HAS1	Q92839	578 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	SYAP1	Q96A49	352 aa	Predicted RBP	13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	ERO1A	Q96HE7	468 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	CCDC34	Q96HJ3	373 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	MAML3	Q96JK9	1138 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	ZFP91	Q96JP5	570 aa	Predicted RBP	13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	SDF4	Q9BRK5	362 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	LRWD1	Q9UFC0	647 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	ASTN1	O14525	1302 aa		13.1	□□□□□ -0.31
CNOT2-223	ENST00000550160	GPR25	O00155	361 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	GNRH1	P01148	92 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	AR	P10275	920 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	TGFB3	P10600	412 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	FAM160A1	Q05DH4	1040 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	KLHL40	Q2TBA0	621 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	KRT79	Q5XKE5	535 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	HAUS3	Q68CZ6	603 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	SHC4	Q6S5L8	630 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	MAMDC4	Q6UXC1	1216 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	IGSF22	Q8N9C0	903 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	SLC5A5	Q92911	643 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	FGD4	Q96M96	766 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	AGO4	Q9HCK5	861 aa	Known RBP	13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	VTA1	Q9NP79	307 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	CCDC39	Q9UFE4	941 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	SYNGAP1	Q96PV0	1343 aa		13.09	□□□□□ -0.31
CNOT2-223	ENST00000550160	SLC26A4	O43511	780 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	TRAK2	O60296	914 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	KIN	O60870	393 aa	Known RBP	13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	FKTN	O75072	461 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	PSMD10	O75832	226 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	PFKFB1	P16118	471 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	ICAM3	P32942	547 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	KRT76	Q01546	638 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	GRIN1	Q05586	938 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	NCAPH2	Q6IBW4	605 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	SEPT14	Q6ZU15	432 aa		13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	TRMT44	Q8IYL2	757 aa	Known RBP	13.08	□□□□□ -0.32
CNOT2-223	ENST00000550160	SYMPK	Q92797	1274 aa	Known RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms