RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 RABEP1Q15276 862 aa29.67■■■□□ 2.34
CPSF6-205ENST00000550075 ME3Q16798 604 aa29.67■■■□□ 2.34
CPSF6-205ENST00000550075 IL27Q8NEV9 243 aa29.67■■■□□ 2.34
CPSF6-205ENST00000550075 AFG1LQ8WV93 481 aa29.67■■■□□ 2.34
CPSF6-205ENST00000550075 MTG1Q9BT17 334 aaPredicted RBP29.67■■■□□ 2.34
CPSF6-205ENST00000550075 ZMYND8Q9ULU4 1186 aaPredicted RBP29.67■■■□□ 2.34
CPSF6-205ENST00000550075 XBP1P17861 261 aa29.66■■■□□ 2.34
CPSF6-205ENST00000550075 NLRP5P59047 1200 aa29.66■■■□□ 2.34
CPSF6-205ENST00000550075 PURAQ00577 322 aaKnown RBP29.66■■■□□ 2.34
CPSF6-205ENST00000550075 TLE2Q04725 743 aa29.66■■■□□ 2.34
CPSF6-205ENST00000550075 NEDD9Q14511 834 aa29.66■■■□□ 2.34
CPSF6-205ENST00000550075 LIMCH1Q9UPQ0 1083 aa29.66■■■□□ 2.34
CPSF6-205ENST00000550075 MYH7BA7E2Y1 1941 aa29.66■■■□□ 2.34
CPSF6-205ENST00000550075 DCDC2CA8MYV0 355 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 SPATA31C2B4DYI2 1134 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 ARVCFO00192 962 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 PQBP1O60828 265 aaKnown RBP29.65■■■□□ 2.34
CPSF6-205ENST00000550075 MMP3P08254 477 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 SREBF1P36956 1147 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 CELF3Q5SZQ8 465 aaKnown RBP29.65■■■□□ 2.34
CPSF6-205ENST00000550075 JAKMIP3Q5VZ66 844 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 PPTC7Q8NI37 304 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 WASF1Q92558 559 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 TOX2Q96NM4 488 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 KIF2CQ99661 725 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 MLXIPQ9HAP2 919 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 TMEM260Q9NX78 707 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 DNAH12Q6ZR08 3092 aa29.65■■■□□ 2.34
CPSF6-205ENST00000550075 LARGE1O95461 756 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 DGKDQ16760 1214 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 ANKRD33Q7Z3H0 272 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 NECAB1Q8N987 351 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 GIMAP8Q8ND71 665 aaPredicted RBP29.64■■■□□ 2.34
CPSF6-205ENST00000550075 PGBD1Q96JS3 809 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 SPATA33Q96N06 139 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 UBIAD1Q9Y5Z9 338 aa29.64■■■□□ 2.34
CPSF6-205ENST00000550075 TLR3O15455 904 aaKnown RBP29.63■■■□□ 2.33
CPSF6-205ENST00000550075 MTMR1Q13613 665 aa29.63■■■□□ 2.33
CPSF6-205ENST00000550075 ITGA7Q13683 1181 aa29.63■■■□□ 2.33
CPSF6-205ENST00000550075 MYSM1Q5VVJ2 828 aa29.63■■■□□ 2.33
CPSF6-205ENST00000550075 GALNT17Q6IS24 598 aa29.63■■■□□ 2.33
CPSF6-205ENST00000550075 SENP7Q9BQF6 1050 aa29.63■■■□□ 2.33
CPSF6-205ENST00000550075 PRDM5Q9NQX1 630 aaPredicted RBP29.63■■■□□ 2.33
CPSF6-205ENST00000550075 MAFGO15525 162 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 ST18O60284 1047 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 CLTBP09497 229 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 SYN1P17600 705 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 ARHGAP4P98171 946 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 ZSCAN31Q96LW9 406 aaPredicted RBP29.62■■■□□ 2.33
CPSF6-205ENST00000550075 PDLIM7Q9NR12 457 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 ORC3Q9UBD5 711 aaPredicted RBP29.62■■■□□ 2.33
CPSF6-205ENST00000550075 SCN10AQ9Y5Y9 1956 aa29.62■■■□□ 2.33
CPSF6-205ENST00000550075 ZNF76P36508 570 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 CDK7P50613 346 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 SEMA3FQ13275 785 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 METTL7BQ6UX53 244 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 SLC43A3Q8NBI5 491 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 JADE2Q9NQC1 790 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 PCDHA4Q9UN74 947 aa29.61■■■□□ 2.33
CPSF6-205ENST00000550075 NOP56O00567 594 aaKnown RBP29.6■■■□□ 2.33
CPSF6-205ENST00000550075 ITGB5P18084 799 aa29.6■■■□□ 2.33
CPSF6-205ENST00000550075 SP2Q02086 613 aa29.6■■■□□ 2.33
CPSF6-205ENST00000550075 TBC1D32Q96NH3 1257 aa29.6■■■□□ 2.33
CPSF6-205ENST00000550075 MXRA8Q9BRK3 442 aa29.6■■■□□ 2.33
CPSF6-205ENST00000550075 SH2B1Q9NRF2 756 aaPredicted RBP29.6■■■□□ 2.33
CPSF6-205ENST00000550075 CTDNEP1O95476 244 aa29.59■■■□□ 2.33
CPSF6-205ENST00000550075 PSMC6P62333 389 aa29.59■■■□□ 2.33
CPSF6-205ENST00000550075 CEP55Q53EZ4 464 aa29.59■■■□□ 2.33
CPSF6-205ENST00000550075 DAGLBQ8NCG7 672 aa29.59■■■□□ 2.33
CPSF6-205ENST00000550075 LBHD1Q9BQE6 289 aaPredicted RBP29.59■■■□□ 2.33
CPSF6-205ENST00000550075 KATNAL1Q9BW62 490 aa29.59■■■□□ 2.33
CPSF6-205ENST00000550075 SORBS3O60504 671 aa29.58■■■□□ 2.33
CPSF6-205ENST00000550075 HOXD8P13378 290 aaPredicted RBP29.58■■■□□ 2.33
CPSF6-205ENST00000550075 CYFIP1Q7L576 1253 aa29.58■■■□□ 2.33
CPSF6-205ENST00000550075 BLIDQ8IZY5 108 aa29.58■■■□□ 2.33
CPSF6-205ENST00000550075 NSUN7Q8NE18 718 aaKnown RBP29.58■■■□□ 2.33
CPSF6-205ENST00000550075 RASGRP4Q8TDF6 673 aa29.58■■■□□ 2.33
CPSF6-205ENST00000550075 AIFM3Q96NN9 605 aa29.58■■■□□ 2.33
CPSF6-205ENST00000550075 DOCK5Q9H7D0 1870 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 PPFIA4O75335 1185 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 HSDL1Q3SXM5 330 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 CHRDL2Q6WN34 429 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 NIPA1Q7RTP0 329 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 FAM126BQ8IXS8 530 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 ALG1Q9BT22 464 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 TMEM39AQ9NV64 488 aa29.57■■■□□ 2.32
CPSF6-205ENST00000550075 GRIN2DO15399 1336 aa29.56■■■□□ 2.32
CPSF6-205ENST00000550075 CYP3A4P08684 503 aa29.56■■■□□ 2.32
CPSF6-205ENST00000550075 FAM47CQ5HY64 1035 aa29.56■■■□□ 2.32
CPSF6-205ENST00000550075 NFRKBQ6P4R8 1299 aa29.56■■■□□ 2.32
CPSF6-205ENST00000550075 BACH2Q9BYV9 841 aa29.56■■■□□ 2.32
CPSF6-205ENST00000550075 LTBP2Q14767 1821 aa29.56■■■□□ 2.32
CPSF6-205ENST00000550075 KIAA0355O15063 1070 aa29.55■■■□□ 2.32
CPSF6-205ENST00000550075 KCNA2P16389 499 aa29.55■■■□□ 2.32
CPSF6-205ENST00000550075 SETQ01105 290 aaPredicted RBP29.55■■■□□ 2.32
CPSF6-205ENST00000550075 PTPN11Q06124 597 aaPredicted RBP29.55■■■□□ 2.32
CPSF6-205ENST00000550075 FAAP100Q0VG06 881 aa29.55■■■□□ 2.32
CPSF6-205ENST00000550075 NBPF20Q3BBV1 942 aa29.55■■■□□ 2.32
CPSF6-205ENST00000550075 CCDC83Q8IWF9 413 aa29.55■■■□□ 2.32
CPSF6-205ENST00000550075 LLPHQ9BRT6 129 aaKnown RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms