RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 COL6A1P12109 1028 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 MNX1P50219 401 aaPredicted RBP17.05■□□□□ 0.32
GPN3-206ENST00000549963 ARHGAP4P98171 946 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 MTMR1Q13613 665 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 SAFBQ15424 915 aaKnown RBP eCLIP17.05■□□□□ 0.32
GPN3-206ENST00000549963 KRT25Q7Z3Z0 450 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 PGBD1Q96JS3 809 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 MXRA8Q9BRK3 442 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
GPN3-206ENST00000549963 UBIAD1Q9Y5Z9 338 aa17.05■□□□□ 0.32
GPN3-206ENST00000549963 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 ARIH2O95376 493 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 CYP3A4P08684 503 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 USP11P51784 963 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 BEX3Q00994 111 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 CEP55Q53EZ4 464 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 COPS5Q92905 334 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 EMID1Q96A84 441 aaPredicted RBP17.04■□□□□ 0.32
GPN3-206ENST00000549963 SENP7Q9BQF6 1050 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 JADE2Q9NQC1 790 aa17.04■□□□□ 0.32
GPN3-206ENST00000549963 ELP1O95163 1332 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 A6NJR5 290 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 EVI5O60447 810 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 GGPS1O95749 300 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 KRT2P35908 639 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 NONOQ15233 471 aaKnown RBP eCLIP17.03■□□□□ 0.32
GPN3-206ENST00000549963 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
GPN3-206ENST00000549963 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 CCSAPQ6IQ19 270 aaPredicted RBP17.03■□□□□ 0.32
GPN3-206ENST00000549963 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 C8orf76Q96K31 380 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 STARD7Q9NQZ5 370 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
GPN3-206ENST00000549963 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.32
GPN3-206ENST00000549963 A0A1W2PQY0 241 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 MYADML2A6NDP7 307 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 NOP56O00567 594 aaKnown RBP17.02■□□□□ 0.32
GPN3-206ENST00000549963 DTNBO60941 627 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 MYL3P08590 195 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 ITGB5P18084 799 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 ARHGAP1Q07960 439 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 DGKDQ16760 1214 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
GPN3-206ENST00000549963 MEIS1O00470 390 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 CTAGE5O15320 804 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 PPFIA4O75335 1185 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 CD2BP2O95400 341 aaKnown RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 MMP1P03956 469 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 UBA1P22314 1058 aaKnown RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 ATN1P54259 1190 aaPredicted RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 SETQ01105 290 aaPredicted RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 SP2Q02086 613 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 GNL2Q13823 731 aaKnown RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 KRT40Q6A162 431 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 CYFIP1Q7L576 1253 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 PLA2G4DQ86XP0 818 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 PPTC7Q8NI37 304 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 NAP1L4Q99733 375 aaKnown RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
GPN3-206ENST00000549963 KCNH7Q9NS40 1196 aa17.01■□□□□ 0.31
GPN3-206ENST00000549963 BRCA2P51587 3418 aa17■□□□□ 0.31
GPN3-206ENST00000549963 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
GPN3-206ENST00000549963 M0R2N6 131 aa17■□□□□ 0.31
GPN3-206ENST00000549963 FOSBP53539 338 aa17■□□□□ 0.31
GPN3-206ENST00000549963 METTL7BQ6UX53 244 aa17■□□□□ 0.31
GPN3-206ENST00000549963 CXCL17Q6UXB2 119 aa17■□□□□ 0.31
GPN3-206ENST00000549963 GJB4Q9NTQ9 266 aa17■□□□□ 0.31
GPN3-206ENST00000549963 TCEAL9Q9UHQ7 104 aa17■□□□□ 0.31
GPN3-206ENST00000549963 MROH7Q68CQ1 1323 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 ADAMTS3O15072 1205 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 MMP3P08254 477 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 PTGS1P23219 599 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 CIITAP33076 1130 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 IRX5P78411 483 aaPredicted RBP16.99■□□□□ 0.31
GPN3-206ENST00000549963 PRR16Q569H4 304 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 CRYGNQ8WXF5 182 aa16.99■□□□□ 0.31
GPN3-206ENST00000549963 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 SORBS3O60504 671 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 PURAQ00577 322 aaKnown RBP16.98■□□□□ 0.31
GPN3-206ENST00000549963 SEMA3FQ13275 785 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 NPY5RQ15761 445 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 INF2Q27J81 1249 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 LRRC26Q2I0M4 334 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 MOXD1Q6UVY6 613 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 PIK3AP1Q6ZUJ8 805 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
GPN3-206ENST00000549963 DIS3L2Q8IYB7 885 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms