RNA–Protein interactions for RNA: ENST00000549710.1

AC011601.1-201, humanhuman

TSL 3 BASIC

Gene AC011601.1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011601.1-201ENST00000549710 TBC1D20Q96BZ9 403 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 SEC62Q99442 399 aaKnown RBP8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 SLC26A6Q9BXS9 759 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 NRSN2Q9GZP1 204 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 MKRN2Q9H000 416 aaKnown RBP8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 TMEM60Q9H2L4 133 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 PRDM6Q9NQX0 595 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 SH3GLB2Q9NR46 395 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
AC011601.1-201ENST00000549710 FAM170AA1A519 330 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 H7C1W4 665 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 H2AFYO75367 372 aaKnown RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 BAIAP3O94812 1187 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 CD4P01730 458 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 HOXC12P31275 282 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 ARL4DP49703 201 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 ZBED6P86452 979 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 RING1Q06587 406 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 C19orf57Q0VDD7 668 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 TBC1D10BQ4KMP7 808 aaPredicted RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 CCDC38Q502W7 563 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 ZC3H12AQ5D1E8 599 aaKnown RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 PPM1JQ5JR12 505 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 AGAP9Q5VTM2 703 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 SLC6A19Q695T7 634 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 USP53Q70EK8 1073 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 SYT9Q86SS6 491 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 GRAMD1CQ8IYS0 662 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 KRT78Q8N1N4 520 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 MIER2Q8N344 545 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 ARHGEF39Q8N4T4 335 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 NKAIN3Q8N8D7 197 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 TMEM145Q8NBT3 493 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 DCAF4Q8WV16 495 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 RPGRQ92834 1020 aaKnown RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 PAWRQ96IZ0 340 aaKnown RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 UBXN10Q96LJ8 280 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 CENPOQ9BU64 300 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 APOL5Q9BWW9 433 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 GTPBP4Q9BZE4 634 aaKnown RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 PICK1Q9NRD5 415 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 SMYD2Q9NRG4 433 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 GPRC5BQ9NZH0 403 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 KCNG1Q9UIX4 513 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 CDC23Q9UJX2 597 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 ATXN7L1Q9ULK2 861 aaPredicted RBP8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 SLC6A14Q9UN76 642 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 CRYL1Q9Y2S2 319 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 TMX2Q9Y320 296 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 PCDHA8Q9Y5H6 950 aa8.45□□□□□ -1.06
AC011601.1-201ENST00000549710 FAM155AB1AL88 458 aaPredicted RBP8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 EYA2O00167 538 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 GOLIM4O00461 696 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 MAFKO60675 156 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 POU2F2P09086 479 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 TGFB3P10600 412 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 GPR3P46089 330 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 DBN1Q16643 649 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 NBPF8Q3BBV2 869 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 SLC35F1Q5T1Q4 408 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 BROXQ5VW32 411 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 SPATA1Q5VX52 437 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 MSL1Q68DK7 614 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 BRINP3Q76B58 766 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 MTDHQ86UE4 582 aaKnown RBP8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 CHST14Q8NCH0 376 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 PPP1R35Q8TAP8 253 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 NELL2Q99435 816 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 MAP3K14Q99558 947 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 DPH2Q9BQC3 489 aaPredicted RBP8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 BHMT2Q9H2M3 363 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 KMT5AQ9NQR1 393 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 CGGBP1Q9UFW8 167 aaPredicted RBP8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 NAGPAQ9UK23 515 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 FBXO10Q9UK96 956 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 NUB1Q9Y5A7 615 aa8.44□□□□□ -1.06
AC011601.1-201ENST00000549710 RRN3P2A6NIE6 340 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 GOLGA8AA7E2F4 631 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 TBC1D8O95759 1140 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 ITGA4P13612 1032 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 ABCB4P21439 1286 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 FGFR3P22607 806 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 RAD52P43351 418 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 PRIM2P49643 509 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 BLMHQ13867 455 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 PRSS53Q2L4Q9 553 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 SYDE1Q6ZW31 735 aaPredicted RBP8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 PDZD4Q76G19 769 aaPredicted RBP8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 HID1Q8IV36 788 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 ZC3H7AQ8IWR0 971 aaKnown RBP8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 CMIPQ8IY22 773 aa8.43□□□□□ -1.06
AC011601.1-201ENST00000549710 C7orf61Q8IZ16 206 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms