RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 PTPRAP18433 802 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 PBX1P40424 430 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 HSD17B4P51659 736 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 CATSPER3Q86XQ3 398 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 CCDC112Q8NEF3 446 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 SRRTQ9BXP5 876 aaKnown RBP21.37■■□□□ 1.01
BRF1-215ENST00000549655 THAP9Q9H5L6 903 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 PPP1R9AQ9ULJ8 1098 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 STK24Q9Y6E0 443 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 POTEFA5A3E0 1075 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 N4BP3O15049 544 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 POTEIP0CG38 1075 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 COPB1P53618 953 aaKnown RBP21.36■■□□□ 1.01
BRF1-215ENST00000549655 BACE1P56817 501 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 POTEGQ6S5H5 508 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 POTEEQ6S8J3 1075 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 CLEC4DQ8WXI8 215 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 DNAJC19Q96DA6 116 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 DUSP9Q99956 384 aaKnown RBP21.36■■□□□ 1.01
BRF1-215ENST00000549655 TMX1Q9H3N1 280 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 AS3MTQ9HBK9 375 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 RAVER2Q9HCJ3 691 aaKnown RBP21.36■■□□□ 1.01
BRF1-215ENST00000549655 TAB2Q9NYJ8 693 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 SBF1O95248 1867 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 USP27XA6NNY8 438 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 NFIBO00712 420 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 RPA1P27694 616 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 ANKRD40Q6AI12 368 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 CSGALNACT2Q8N6G5 542 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 ZNF280CQ8ND82 737 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 NOC3LQ8WTT2 800 aaKnown RBP21.36■■□□□ 1.01
BRF1-215ENST00000549655 VPS16Q9H269 839 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 BMP2KQ9NSY1 1161 aaPredicted RBP21.36■■□□□ 1.01
BRF1-215ENST00000549655 PPP2R3BQ9Y5P8 575 aa21.36■■□□□ 1.01
BRF1-215ENST00000549655 SPATA31C1P0DKV0 1188 aa21.35■■□□□ 1.01
BRF1-215ENST00000549655 EHHADHQ08426 723 aa21.35■■□□□ 1.01
BRF1-215ENST00000549655 PSMD2Q13200 908 aa21.35■■□□□ 1.01
BRF1-215ENST00000549655 CEP55Q53EZ4 464 aa21.35■■□□□ 1.01
BRF1-215ENST00000549655 CCAR2Q8N163 923 aaKnown RBP21.35■■□□□ 1.01
BRF1-215ENST00000549655 C16orf45Q96MC5 204 aaPredicted RBP21.35■■□□□ 1.01
BRF1-215ENST00000549655 KCND1Q9NSA2 647 aa21.35■■□□□ 1.01
BRF1-215ENST00000549655 ALAS1P13196 640 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 KCNJ6P48051 423 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 ADKP55263 362 aaKnown RBP21.34■■□□□ 1.01
BRF1-215ENST00000549655 MCF2L2Q86YR7 1114 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 TC2NQ8N9U0 490 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 EEF1GP26641 437 aaKnown RBP21.34■■□□□ 1.01
BRF1-215ENST00000549655 COASYQ13057 564 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 GPBP1Q86WP2 473 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 KLRG1Q96E93 195 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 PANK4Q9NVE7 773 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 TRMT1Q9NXH9 659 aaKnown RBP21.34■■□□□ 1.01
BRF1-215ENST00000549655 MAGEC2Q9UBF1 373 aaPredicted RBP21.34■■□□□ 1.01
BRF1-215ENST00000549655 CTDP1Q9Y5B0 961 aaPredicted RBP21.34■■□□□ 1.01
BRF1-215ENST00000549655 ZHX2Q9Y6X8 837 aa21.34■■□□□ 1.01
BRF1-215ENST00000549655 EML1O00423 815 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 MEIS1O00470 390 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 DDNO94850 711 aaPredicted RBP21.33■■□□□ 1.01
BRF1-215ENST00000549655 HOXA7P31268 230 aaPredicted RBP21.33■■□□□ 1.01
BRF1-215ENST00000549655 SLC12A3P55017 1021 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 LRCH2Q5VUJ6 765 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 E4F1Q66K89 784 aaPredicted RBP21.33■■□□□ 1.01
BRF1-215ENST00000549655 CENPPQ6IPU0 288 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 GUF1Q8N442 669 aaKnown RBP21.33■■□□□ 1.01
BRF1-215ENST00000549655 SLC5A5Q92911 643 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 ZFP91Q96JP5 570 aaPredicted RBP21.33■■□□□ 1.01
BRF1-215ENST00000549655 SEMA6BQ9H3T3 888 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 HOMER2Q9NSB8 354 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 COL20A1Q9P218 1284 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 DNM3Q9UQ16 869 aa21.33■■□□□ 1.01
BRF1-215ENST00000549655 ZBED4O75132 1171 aa21.32■■□□□ 1
BRF1-215ENST00000549655 PSMD10O75832 226 aa21.32■■□□□ 1
BRF1-215ENST00000549655 CYP11B2P19099 503 aa21.32■■□□□ 1
BRF1-215ENST00000549655 TERF1P54274 439 aa21.32■■□□□ 1
BRF1-215ENST00000549655 PSMC6P62333 389 aa21.32■■□□□ 1
BRF1-215ENST00000549655 OTOP1Q7RTM1 612 aa21.32■■□□□ 1
BRF1-215ENST00000549655 PPFIBP1Q86W92 1011 aa21.32■■□□□ 1
BRF1-215ENST00000549655 TMEM139Q8IV31 216 aa21.32■■□□□ 1
BRF1-215ENST00000549655 EIF2AK1Q9BQI3 630 aaKnown RBP21.32■■□□□ 1
BRF1-215ENST00000549655 POLR3CQ9BUI4 534 aaPredicted RBP21.32■■□□□ 1
BRF1-215ENST00000549655 RABGAP1Q9Y3P9 1069 aa21.32■■□□□ 1
BRF1-215ENST00000549655 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
BRF1-215ENST00000549655 SSC5DA1L4H1 1573 aa21.32■■□□□ 1
BRF1-215ENST00000549655 AKR1B15C9JRZ8 316 aaPredicted RBP21.32■■□□□ 1
BRF1-215ENST00000549655 GHRHRQ02643 423 aa21.32■■□□□ 1
BRF1-215ENST00000549655 CYP4A11Q02928 519 aa21.32■■□□□ 1
BRF1-215ENST00000549655 SUPT20HL1Q3ZLR7 823 aa21.32■■□□□ 1
BRF1-215ENST00000549655 MUM1L1Q5H9M0 696 aa21.32■■□□□ 1
BRF1-215ENST00000549655 SLC30A10Q6XR72 485 aa21.32■■□□□ 1
BRF1-215ENST00000549655 EEF2KMTQ96G04 330 aa21.32■■□□□ 1
BRF1-215ENST00000549655 ITIH6Q6UXX5 1313 aa21.31■■□□□ 1
BRF1-215ENST00000549655 NPHP3-ACAD11A0A0J9YXS1 232 aa21.31■■□□□ 1
BRF1-215ENST00000549655 VWA5AO00534 786 aa21.31■■□□□ 1
BRF1-215ENST00000549655 HMGCS2P54868 508 aa21.31■■□□□ 1
BRF1-215ENST00000549655 SETQ01105 290 aaPredicted RBP21.31■■□□□ 1
BRF1-215ENST00000549655 RBL2Q08999 1139 aa21.31■■□□□ 1
BRF1-215ENST00000549655 PPP2R5CQ13362 524 aa21.31■■□□□ 1
BRF1-215ENST00000549655 ARSHQ5FYA8 562 aa21.31■■□□□ 1
BRF1-215ENST00000549655 CCDC65Q8IXS2 484 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms