RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 FBXO11Q86XK2 927 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 RNF135Q8IUD6 432 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 TBC1D5Q92609 795 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 TOP1MTQ969P6 601 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 TAAR1Q96RJ0 339 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 DDX41Q9UJV9 622 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 HAS3O00219 553 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 FOXP2O15409 715 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 NCK2O43639 380 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 F2P00734 622 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 PDHBP11177 359 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 DLX2Q07687 328 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 LAMC2Q13753 1193 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 STXBP2Q15833 593 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 RPAINQ86UA6 219 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 NSUN6Q8TEA1 469 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 EDAQ92838 391 aa12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 TRIP12Q14669 1992 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-206ENST00000549358 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 MBTPS2O43462 519 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 PTPN5P54829 565 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 ZNF543Q08ER8 600 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 CTC1Q2NKJ3 1217 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 PBXIP1Q96AQ6 731 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 FSD1Q9BTV5 496 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 COL20A1Q9P218 1284 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 C5orf42Q9H799 3197 aa12.67□□□□□ -0.38
TRAFD1-206ENST00000549358 STXBP3O00186 592 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 ORC4O43929 436 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 SORBS3O60504 671 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 HYAL1Q12794 435 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 VPS53Q5VIR6 699 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 BMP8AQ7Z5Y6 402 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 SERINC5Q86VE9 423 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 SEPT8Q92599 483 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 IFIH1Q9BYX4 1025 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 OSBPL7Q9BZF2 842 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
TRAFD1-206ENST00000549358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 TMEM221A6NGB7 291 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 M0R296 226 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 GRM6O15303 877 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 PPFIA4O75335 1185 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 CSPG5O95196 566 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 FGRP09769 529 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 EIF2AK2P19525 551 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 CTNNB1P35222 781 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 FIBCD1Q8N539 461 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 ATP6V0A1Q93050 837 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 IL17RAQ96F46 866 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
TRAFD1-206ENST00000549358 TRIOO75962 3097 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 LINC01565O15544 149 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 TCF15Q12870 199 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 SMAD4Q13485 552 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 HSDL1Q3SXM5 330 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 MCF2L2Q86YR7 1114 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 TTC14Q96N46 770 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 PRRX2Q99811 253 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 FAM86C1Q9NVL1 165 aa12.64□□□□□ -0.39
TRAFD1-206ENST00000549358 ABCB11O95342 1321 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 C17orf102A2RUQ5 167 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 C5orf67F2Z3F1 127 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 TREHO43280 583 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 GFRA3O60609 400 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 TBX10O75333 385 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 RB1P06400 928 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 NR3C2P08235 984 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 CTSHP09668 335 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 SNHG28P0DPA3 235 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 BMPR1AP36894 532 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 PLCB2Q00722 1185 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms