RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 HSDL1Q3SXM5 330 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 PCNX4Q63HM2 1172 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 RAB11FIP4Q86YS3 637 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 CCDC82Q8N4S0 544 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 RETREG2Q8NC44 543 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 SCLYQ96I15 445 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 TTYH1Q9H313 450 aaPredicted RBP21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 MLXIPQ9HAP2 919 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 SPATA31C2B4DYI2 1134 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 ZBTB43O43298 467 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 FIBPO43427 364 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 NEFLP07196 543 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 DNAJB2P25686 324 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 RFC2P35250 354 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 PSEN2P49810 448 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 NEDD9Q14511 834 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 TEX2Q8IWB9 1127 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 C7orf31Q8N865 590 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 PPP1R13LQ8WUF5 828 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 VWCEQ96DN2 955 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 ZFP91Q96JP5 570 aaPredicted RBP21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 GTF2IRD1Q9UHL9 959 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
CHMP1A-207ENST00000549328 HSPA4P34932 840 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 MFSD10Q14728 455 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 RTN1Q16799 776 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 KIAA0753Q2KHM9 967 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 GDF6Q6KF10 455 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 OTOP2Q7RTS6 562 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 CCDC155Q8N6L0 562 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 CAGE1Q8TC20 777 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 GPKOWQ92917 476 aaPredicted RBP eCLIP21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 CTAGE1Q96RT6 745 aa21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 CDX2Q99626 313 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 CXXC1Q9P0U4 656 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-207ENST00000549328 hCG_1642624A0A1W2PR95 340 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 REC8O95072 547 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 IQCF3P0C7M6 154 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 ZNF286BP0CG31 522 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 FUT2Q10981 343 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 METTL7BQ6UX53 244 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 SENP7Q9BQF6 1050 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 RTEL1Q9NZ71 1219 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 HDAC6Q9UBN7 1215 aa21.44■■□□□ 1.02
CHMP1A-207ENST00000549328 EPB41L2O43491 1005 aaKnown RBP21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 RBL2Q08999 1139 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 SEMA3FQ13275 785 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 HEATR3Q7Z4Q2 680 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 NLRX1Q86UT6 975 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 SLC17A8Q8NDX2 589 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 AFAP1L1Q8TED9 768 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 TIFAQ96CG3 184 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 C16orf70Q9BSU1 422 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 ALG1Q9BT22 464 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 PBX4Q9BYU1 374 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 CNTNAP5Q8WYK1 1306 aa21.43■■□□□ 1.02
CHMP1A-207ENST00000549328 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 GRXCR1A8MXD5 290 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 hCG_1984214I3L0E3 225 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 FGD1P98174 961 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 RAB30Q15771 203 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 FBXL16Q8N461 479 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 ZNF713Q8N859 430 aaPredicted RBP21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 GIMAP8Q8ND71 665 aaPredicted RBP21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 CDHR1Q96JP9 859 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 USP26Q9BXU7 913 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 SLC4A7Q9Y6M7 1214 aa21.42■■□□□ 1.02
CHMP1A-207ENST00000549328 SPDYE3A6NKU9 549 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 NOP56O00567 594 aaKnown RBP21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 SORBS3O60504 671 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 PARNO95453 639 aaKnown RBP21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 ACTN1P12814 892 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 PTK7Q13308 1070 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 PPP1R18Q6NYC8 613 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 BLOC1S2Q6QNY1 142 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 CYFIP1Q7L576 1253 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 DEFB128Q7Z7B8 93 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 GPRASP2Q96D09 838 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 JAKMIP1Q96N16 626 aaKnown RBP21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 ZNF576Q9H609 170 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 BCAS3Q9H6U6 928 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 FAM217BQ9NTX9 383 aaPredicted RBP21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 MSRAQ9UJ68 235 aa21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 V9GY48 417 aaPredicted RBP21.41■■□□□ 1.02
CHMP1A-207ENST00000549328 CCDC196A0A1B0GTZ2 297 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 H3BRB1 525 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 SELPP16109 830 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 PBX2P40425 430 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 UBE2SQ16763 222 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 WWC2Q6AWC2 1192 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 DHX38Q92620 1227 aaKnown RBP21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 TUT1Q9H6E5 874 aaKnown RBP21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 PCDHA6Q9UN73 950 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 PCDHA8Q9Y5H6 950 aa21.4■■□□□ 1.02
CHMP1A-207ENST00000549328 MAFGO15525 162 aa21.39■■□□□ 1.01
CHMP1A-207ENST00000549328 LGALS2P05162 132 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms