RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CNOT11Q9UKZ1 510 aaKnown RBP6.63□□□□□ -1.35
CCDC38-206ENST00000548771 AKAP8O43823 692 aaKnown RBP6.62□□□□□ -1.35
CCDC38-206ENST00000548771 DLX3O60479 287 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 ITGA1P56199 1179 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 ADAM9Q13443 819 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 DDR2Q16832 855 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 ADAMTS17Q8TE56 1095 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 RBM15Q96T37 977 aaKnown RBP eCLIP6.62□□□□□ -1.35
CCDC38-206ENST00000548771 PCDHA2Q9Y5H9 948 aa6.62□□□□□ -1.35
CCDC38-206ENST00000548771 TCRBV5S2A0A599 114 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 MYO1BO43795 1136 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 DNAJA1P31689 397 aaKnown RBP6.61□□□□□ -1.35
CCDC38-206ENST00000548771 KCNJ6P48051 423 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 CD300LDQ6UXZ3 194 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 ANKS3Q6ZW76 656 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 FERMT3Q86UX7 667 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 ARRDC4Q8NCT1 418 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC38-206ENST00000548771 SGSM3Q96HU1 749 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 GPR20Q99678 358 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 NGRNQ9NPE2 291 aaKnown RBP6.61□□□□□ -1.35
CCDC38-206ENST00000548771 HSPBP1Q9NZL4 362 aa6.61□□□□□ -1.35
CCDC38-206ENST00000548771 HGSO14964 777 aaPredicted RBP6.6□□□□□ -1.35
CCDC38-206ENST00000548771 SMARCA5O60264 1052 aaPredicted RBP6.6□□□□□ -1.35
CCDC38-206ENST00000548771 TTLL6Q8N841 843 aa6.6□□□□□ -1.35
CCDC38-206ENST00000548771 KCTD13Q8WZ19 329 aa6.6□□□□□ -1.35
CCDC38-206ENST00000548771 ST7Q9NRC1 585 aa6.6□□□□□ -1.35
CCDC38-206ENST00000548771 WASF3Q9UPY6 502 aa6.6□□□□□ -1.35
CCDC38-206ENST00000548771 MYRFQ9Y2G1 1151 aa6.6□□□□□ -1.35
CCDC38-206ENST00000548771 MSCO60682 206 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 CHRNA2Q15822 529 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 FAM26FQ5R3K3 315 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 UBXN11Q5T124 520 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 RSPO2Q6UXX9 243 aaPredicted RBP6.59□□□□□ -1.35
CCDC38-206ENST00000548771 STK32CQ86UX6 486 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 PDGFDQ9GZP0 370 aaPredicted RBP6.59□□□□□ -1.35
CCDC38-206ENST00000548771 GPR27Q9NS67 375 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 USP40Q9NVE5 1235 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 DTLQ9NZJ0 730 aa6.59□□□□□ -1.35
CCDC38-206ENST00000548771 LRG1P02750 347 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 STAT5AP42229 794 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 STEAP3Q658P3 488 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 ZC3H18Q86VM9 953 aaKnown RBP6.58□□□□□ -1.36
CCDC38-206ENST00000548771 IER2Q9BTL4 223 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 ARHGEF4Q9NR80 690 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 CLDND1Q9NY35 253 aa6.58□□□□□ -1.36
CCDC38-206ENST00000548771 COA3Q9Y2R0 106 aaPredicted RBP6.58□□□□□ -1.36
CCDC38-206ENST00000548771 AGRPO00253 132 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 ITGB3P05106 788 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 FGFR1P11362 822 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 CNR2P34972 360 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 GJA9P57773 515 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 NKX3-2P78367 333 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 RAB33AQ14088 237 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 HSP90AA2PQ14568 343 aaPredicted RBP6.57□□□□□ -1.36
CCDC38-206ENST00000548771 NTRK3Q16288 839 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 TXNDC5Q8NBS9 432 aaKnown RBP6.57□□□□□ -1.36
CCDC38-206ENST00000548771 ST13P5Q8NFI4 369 aaPredicted RBP6.57□□□□□ -1.36
CCDC38-206ENST00000548771 DDX1Q92499 740 aaKnown RBP6.57□□□□□ -1.36
CCDC38-206ENST00000548771 OSBP2Q969R2 916 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 TOE1Q96GM8 510 aaKnown RBP6.57□□□□□ -1.36
CCDC38-206ENST00000548771 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
CCDC38-206ENST00000548771 SMOC1Q9H4F8 434 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 SLC6A20Q9NP91 592 aa6.57□□□□□ -1.36
CCDC38-206ENST00000548771 K7ESM1 405 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 SUV39H1O43463 412 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 ZNF28P17035 718 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 ZXDAP98168 799 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 RGL3Q3MIN7 710 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 CYP4F22Q6NT55 531 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 PHOSPHO1Q8TCT1 267 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 CHAMP1Q96JM3 812 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 PPARGC1AQ9UBK2 798 aaKnown RBP6.56□□□□□ -1.36
CCDC38-206ENST00000548771 ASH2LQ9UBL3 628 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 PCDHB4Q9Y5E5 795 aa6.56□□□□□ -1.36
CCDC38-206ENST00000548771 MROH6A6NGR9 719 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 DGKIO75912 1065 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 TNFRSF1AP19438 455 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 KIAA2012Q0VF49 1180 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
CCDC38-206ENST00000548771 MCTP2Q6DN12 878 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 PROSER1Q86XN7 944 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 DCAF4Q8WV16 495 aa6.55□□□□□ -1.36
CCDC38-206ENST00000548771 ZNF669Q96BR6 464 aaPredicted RBP6.55□□□□□ -1.36
CCDC38-206ENST00000548771 AARSD1Q9BTE6 412 aaKnown RBP6.55□□□□□ -1.36
CCDC38-206ENST00000548771 R3HCC1Q9Y3T6 440 aaKnown RBP6.55□□□□□ -1.36
CCDC38-206ENST00000548771 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCDC38-206ENST00000548771 TBC1D10BQ4KMP7 808 aaPredicted RBP6.54□□□□□ -1.36
CCDC38-206ENST00000548771 TTLL11Q8NHH1 800 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 CLEC4DQ8WXI8 215 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 MBD6Q96DN6 1003 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 PHF20Q9BVI0 1012 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 JAM3Q9BX67 310 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 MYOTQ9UBF9 498 aa6.54□□□□□ -1.36
CCDC38-206ENST00000548771 IQCA1LA6NCM1 817 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms