RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZNF618Q5T7W0 954 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 ASTLQ6HA08 431 aaPredicted RBP16.56■□□□□ 0.24
PTCH1-217ENST00000548420 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 TOP1MTQ969P6 601 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 CCDC17Q96LX7 622 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 YME1L1Q96TA2 773 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 LMAN2LQ9H0V9 348 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 ACAD9Q9H845 621 aa16.56■□□□□ 0.24
PTCH1-217ENST00000548420 BARX2Q9UMQ3 279 aaPredicted RBP16.56■□□□□ 0.24
PTCH1-217ENST00000548420 RBM47A0AV96 593 aaKnown RBP16.55■□□□□ 0.24
PTCH1-217ENST00000548420 A6NJR5 290 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 F5H6K3 240 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 UPP2O95045 317 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 CTNNB1P35222 781 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 KLRC3Q07444 240 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 C12orf60Q5U649 245 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 PLEKHM2Q8IWE5 1019 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 DCLK2Q8N568 766 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
PTCH1-217ENST00000548420 BAZ2AQ9UIF9 1905 aaKnown RBP16.55■□□□□ 0.24
PTCH1-217ENST00000548420 GSG1L2A8MUP6 293 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 BRD1O95696 1058 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 LMNAP02545 664 aaKnown RBP16.54■□□□□ 0.24
PTCH1-217ENST00000548420 BMPR1AP36894 532 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 SESTD1Q86VW0 696 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 KREMEN2Q8NCW0 462 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 KCNG4Q8TDN1 519 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 SUSD6Q92537 303 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
PTCH1-217ENST00000548420 GREB1LQ9C091 1923 aaPredicted RBP16.54■□□□□ 0.24
PTCH1-217ENST00000548420 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-217ENST00000548420 DNAJB1P25685 340 aa16.53■□□□□ 0.24
PTCH1-217ENST00000548420 OAZ1P54368 228 aa16.53■□□□□ 0.24
PTCH1-217ENST00000548420 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
PTCH1-217ENST00000548420 SBK1Q52WX2 424 aa16.53■□□□□ 0.24
PTCH1-217ENST00000548420 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
PTCH1-217ENST00000548420 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
PTCH1-217ENST00000548420 KAT2BQ92831 832 aa16.53■□□□□ 0.24
PTCH1-217ENST00000548420 M0R2C6 588 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 GPAA1O43292 621 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 PI15O43692 258 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 RB1P06400 928 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 GNAT2P19087 354 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 ANGPT1Q15389 498 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
PTCH1-217ENST00000548420 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.24
PTCH1-217ENST00000548420 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.24
PTCH1-217ENST00000548420 ZFYVE26Q68DK2 2539 aa16.51■□□□□ 0.23
PTCH1-217ENST00000548420 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
PTCH1-217ENST00000548420 KPNA6O60684 536 aa16.51■□□□□ 0.23
PTCH1-217ENST00000548420 MMP1P03956 469 aa16.51■□□□□ 0.23
PTCH1-217ENST00000548420 ATF7P17544 494 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-217ENST00000548420 CWF19L1Q69YN2 538 aaKnown RBP16.51■□□□□ 0.23
PTCH1-217ENST00000548420 C11orf84Q9BUA3 381 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-217ENST00000548420 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-217ENST00000548420 CLCN5P51795 746 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 ATXN1P54253 815 aaKnown RBP16.5■□□□□ 0.23
PTCH1-217ENST00000548420 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-217ENST00000548420 HIC1Q14526 733 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 PLEKHG4Q58EX7 1191 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 ZBTB33Q86T24 672 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 DDRGK1Q96HY6 314 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 TRERF1Q96PN7 1200 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-217ENST00000548420 HDAC6Q9UBN7 1215 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 GTF2IRD1Q9UHL9 959 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 R4GN57 208 aa16.5■□□□□ 0.23
PTCH1-217ENST00000548420 NRIP1P48552 1158 aa16.49■□□□□ 0.23
PTCH1-217ENST00000548420 FIBCD1Q8N539 461 aa16.49■□□□□ 0.23
PTCH1-217ENST00000548420 VN1R2Q8NFZ6 395 aa16.49■□□□□ 0.23
PTCH1-217ENST00000548420 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
PTCH1-217ENST00000548420 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
PTCH1-217ENST00000548420 FOXP2O15409 715 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 PDE4AP27815 886 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 RBM23Q86U06 439 aaKnown RBP16.48■□□□□ 0.23
PTCH1-217ENST00000548420 AMOTL1Q8IY63 956 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
PTCH1-217ENST00000548420 ARIH2O95376 493 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 ALAS1P13196 640 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 ALDH5A1P51649 535 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-217ENST00000548420 SNAP25P60880 206 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 PTK7Q13308 1070 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 BRDTQ58F21 947 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-217ENST00000548420 UBALD2Q8IYN6 164 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
PTCH1-217ENST00000548420 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
PTCH1-217ENST00000548420 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 IFIH1Q9BYX4 1025 aaKnown RBP16.47■□□□□ 0.23
PTCH1-217ENST00000548420 SEMA4AQ9H3S1 761 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 RC3H2Q9HBD1 1191 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms