RNA–Protein interactions for RNA: ENST00000548364.5

C12orf54-203, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf54, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-203ENST00000548364 SLC34A2O95436 690 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 GGPS1O95749 300 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 TIMP1P01033 207 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 IFNAR1P17181 557 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 GNA11P29992 359 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 FUT2Q10981 343 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 LY6KQ17RY6 165 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 METTL7BQ6UX53 244 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 MLXIPQ9HAP2 919 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
C12orf54-203ENST00000548364 NOD1Q9Y239 953 aa13.21□□□□□ -0.29
C12orf54-203ENST00000548364 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 STXBP3O00186 592 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 PRPF3O43395 683 aaKnown RBP13.2□□□□□ -0.3
C12orf54-203ENST00000548364 F2P00734 622 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 CD4P01730 458 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 PFKMP08237 780 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 CDC27P30260 824 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
C12orf54-203ENST00000548364 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 IL31RAQ8NI17 732 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 AFG1LQ8WV93 481 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
C12orf54-203ENST00000548364 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 HIPK3Q9H422 1215 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
C12orf54-203ENST00000548364 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
C12orf54-203ENST00000548364 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 PPFIA4O75335 1185 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 RGS20O76081 388 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 CPA1P15085 419 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 XBP1P17861 261 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
C12orf54-203ENST00000548364 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
C12orf54-203ENST00000548364 MTMR1Q13613 665 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
C12orf54-203ENST00000548364 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 COPS5Q92905 334 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 BADQ92934 168 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 ANO3Q9BYT9 981 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 UPF3BQ9BZI7 483 aaKnown RBP13.19□□□□□ -0.3
C12orf54-203ENST00000548364 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 LAMA3Q16787 3333 aa13.19□□□□□ -0.3
C12orf54-203ENST00000548364 hCG_1642624A0A1W2PR95 340 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 SMCO2A6NFE2 343 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 B4GALT4O60513 344 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 DEXIO95424 95 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
C12orf54-203ENST00000548364 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
C12orf54-203ENST00000548364 RFC2P35250 354 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 ADD1P35611 737 aaKnown RBP13.18□□□□□ -0.3
C12orf54-203ENST00000548364 SREBF1P36956 1147 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 PSMC6P62333 389 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
C12orf54-203ENST00000548364 BFSP2Q13515 415 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 TOB2Q14106 344 aaPredicted RBP13.18□□□□□ -0.3
C12orf54-203ENST00000548364 UBE2SQ16763 222 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 C7orf31Q8N865 590 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 ZMYND12Q9H0C1 365 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
C12orf54-203ENST00000548364 TCEAL9Q9UHQ7 104 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
C12orf54-203ENST00000548364 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
C12orf54-203ENST00000548364 MFSD10Q14728 455 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 NBPF20Q3BBV1 942 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 GALNT17Q6IS24 598 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 NIPA1Q7RTP0 329 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 WASF1Q92558 559 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
C12orf54-203ENST00000548364 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
C12orf54-203ENST00000548364 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
C12orf54-203ENST00000548364 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
C12orf54-203ENST00000548364 RPLP2P05387 115 aaKnown RBP13.16□□□□□ -0.3
C12orf54-203ENST00000548364 ZNF286BP0CG31 522 aa13.16□□□□□ -0.3
C12orf54-203ENST00000548364 GNAT1P11488 350 aa13.16□□□□□ -0.3
C12orf54-203ENST00000548364 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
C12orf54-203ENST00000548364 PSEN2P49810 448 aa13.16□□□□□ -0.3
C12orf54-203ENST00000548364 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms