RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 ZHX3Q9H4I2 956 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
RNF41-203ENST00000547967 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 PLA2G6O60733 806 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 ERCC3P19447 782 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 CCNE1P24864 410 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 CIITAP33076 1130 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 UBXN1Q04323 297 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 SPAG1Q07617 926 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 DLK2Q6UY11 383 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 TMX1Q9H3N1 280 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 SEMA6BQ9H3T3 888 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 ZNF536O15090 1300 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
RNF41-203ENST00000547967 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 EML1O00423 815 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 VCAM1P19320 739 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 CASP14P31944 242 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNF41-203ENST00000547967 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 GPBP1Q86WP2 473 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 CCDC112Q8NEF3 446 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 DNAJC19Q96DA6 116 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 FAM20AQ96MK3 541 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 MAGEC2Q9UBF1 373 aaPredicted RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 TBX3O15119 743 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 NKRFO15226 690 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNF41-203ENST00000547967 ICAM1P05362 532 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 KRT18P05783 430 aaKnown RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 CYP3A4P08684 503 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 SPATA31C1P0DKV0 1188 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 PBX1P40424 430 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 HYIQ5T013 277 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 ERMNQ8TAM6 284 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 LPAR1Q92633 364 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
RNF41-203ENST00000547967 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
RNF41-203ENST00000547967 ABCB11O95342 1321 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 BICDL2A1A5D9 508 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
RNF41-203ENST00000547967 COASYQ13057 564 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 DCAF15Q66K64 600 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 PPP1R13BQ96KQ4 1090 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 GYPCP04921 128 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF41-203ENST00000547967 CEP55Q53EZ4 464 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 TSC1Q92574 1164 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 DNM3Q9UQ16 869 aa13.12□□□□□ -0.31
RNF41-203ENST00000547967 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
RNF41-203ENST00000547967 B4DLN1 442 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 ARP10275 920 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 CYP11B2P19099 503 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 RPA1P27694 616 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 TUBGCP2Q9BSJ2 902 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 FHDC1Q9C0D6 1143 aaPredicted RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 PTPRAP18433 802 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 LMNB1P20700 586 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 HMGCS2P54868 508 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 MTF1Q14872 753 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 PIGOQ8TEQ8 1089 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
RNF41-203ENST00000547967 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
RNF41-203ENST00000547967 SOWAHDA6NJG2 315 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms